Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq227744 102 2e-17 >seq227744 Length=1455 Score = 102 bits (112), Expect = 2e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 32928 TCCTTCTATATAAACCTGCGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATTTT 32987 |||||| ||||| || || || ||||| |||||||| || || |||| ||| || | ||| Sbjct 353 TCCTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCAGCAATTTCTGCTAATTT 294 Query 32988 TCCGAAGATAACAACTCGATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTGTC 33047 ||| || | ||| | |||||||||||| || | |||||| ||||| || || | || || Sbjct 293 TCCAAATAAAACTATTCGATGCCATTCTGTTTTTTCTTTATTTTCCCCAGTGTTTTTATC 234 Query 33048 TTTCCA 33053 |||||| Sbjct 233 TTTCCA 228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142543019101660