Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq230409 86.0 3e-12 seq125066 86.0 3e-12 >seq230409 Length=1439 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61302 TCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCT 61361 |||||||||||||||||||||| | |||| |||||| | ||||||||||||||||||| Sbjct 1267 TCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCAAATCCT 1208 Query 61362 GCACG 61366 ||||| Sbjct 1207 GCACG 1203 >seq125066 Length=2368 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61302 TCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCT 61361 |||||||||||||||||||||| | |||| |||||| | ||||||||||||||||||| Sbjct 2135 TCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCAAATCCT 2076 Query 61362 GCACG 61366 ||||| Sbjct 2075 GCACG 2071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 232416369157940