Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_014663.1 Length=169947 Score E Sequences producing significant alignments: (Bits) Value seq159469 82.4 8e-11 >seq159469 Length=1977 Score = 82.4 bits (90), Expect = 8e-11 Identities = 270/418 (65%), Gaps = 4/418 (1%) Strand=Plus/Plus Query 147748 TTGTTCAATTGAATTCCATAGTCCATGTGACGGATACGGTTTTCTTCAATACCTTTGTTG 147807 || || | ||||| | | || || || ||||| | | ||||||||||| ||| | || Sbjct 1289 TTATTAATTTGAAGTGCGTAATCAATATGACGCACTCTATTTTCTTCAATTCCTCTATTA 1348 Query 147808 TTCTTGAGAACCATCAAGTTCTCACATTCAAGGTGCCAAATCGGCCAGTAGCAAGTTGCC 147867 || || | ||| | || | ||| ||||| ||||| || || | | |||||| Sbjct 1349 TTTTTTAAAACTAATAAACTTTCAACTTCAAAATGCCATATTGGATAAAAAATAGTTGCA 1408 Query 147868 GAACCTTTACGAATACCACCCTGTGAACAAGAGTGTACAGCAGCATTTTTAA--GTTTCC 147925 | ||| | | || || |||||||| || | ||| ||| ||| || |||| Sbjct 1409 GCTCCTCCTCTCACTCCGCCTTGTGAACAGGATTTTACGGCA--CTTTGAAAGTGTTTAT 1466 Query 147926 AGAATGGTGTAACACCGGTGTGCTTAACTTCACCAGGACCAATCTTAGAACCTTCAGCTC 147985 | || ||| || ||| || || ||||||| | ||| | ||| || | Sbjct 1467 AAAAAGGTATACAACCAGTATGAAATGCTTCACCGTTTCTAATAGGACTTCCTAACGCGC 1526 Query 147986 GGATTGCTCCTCCACTGATGCCAATACCTGCTCGTTTAGACACATATTTTACAATAGCTG 148045 | ||| ||| || | || || || || || |||| || |||||||| ||||||| Sbjct 1527 GAATTTGTCCCGCATTAATACCGATTCCAGCACGTTGTGATACATATTTAACAATAGAGC 1586 Query 148046 ATGTGGTTTCAGTAATTGATTCTAAATCGTCGCCAGTTTCAATCAATACACACGAACTGA 148105 || || || |||| || | ||||| || || ||| || || ||||| ||||| | Sbjct 1587 TAGTAGTAGCATTAATAGAGTTTAAATTATCAGCACATTCGATTAAAACACAAGAACTAA 1646 Query 148106 ATTGACGTGTTGGAGTCCGGACACCTGCAAGAATAGGAGTTGGCAAACTAATTTTGAA 148163 | ||||| || ||||| || || || | | ||| || ||||| || |||||| || Sbjct 1647 ACTGACGAGTAGGAGTTCGTACTCCAGACATAATGGGTGTTGGTAATGAAATTTTAAA 1704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537748111129200