Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq219143 95.1 2e-15 >seq219143 Length=1507 Score = 95.1 bits (104), Expect = 2e-15 Identities = 174/255 (68%), Gaps = 0/255 (0%) Strand=Plus/Plus Query 25031 TGAAGTATCAGAAATTTCGAAATCACTTAAATCCATGGCGAAAGAATTTAATTGTCCAAT 25090 |||| | ||||||| || | | | | ||| | | || |||||| || | |||| | Sbjct 1141 TGAAATTGCAGAAATATCTAGAACTTTAAAAGCATTAGCAAAAGAACTTCAAGTTCCAGT 1200 Query 25091 GATCGCGTTATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGCGCCCAATTAA 25150 ||| || |||||||| ||||| || | | ||| | ||| |||||| | ||| | || Sbjct 1201 GATAGCATTATCACAACTTAATCGTTCTTTAGAACAAAGATCTGATAAGAGACCAGTAAA 1260 Query 25151 CTCAGACTTGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCGCATTGATATA 25210 ||||| || || || || || | ||||||| ||||||||| |||| || ||||| Sbjct 1261 TTCAGATTTACGTGAATCAGGTTCTTTAGAACAAGATGCTGATTTAATAATGTTTATATA 1320 Query 25211 CCGAGACGAAGTGTATAACCCCGACAGCTCTGACAAAGGCATTGCCGAGATTATCATTGG 25270 |||||| ||| | ||| | | || | ||||| ||||| || || || || || Sbjct 1321 CCGAGATGAAATTTATCATGAAAATAGTGATTTTAAAGGAATTGCAGAAATAATAATAGG 1380 Query 25271 CAAACACAGGAATGG 25285 ||||| || ||||| Sbjct 1381 AAAACAAAGAAATGG 1395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100473305712960