Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq159469 82.4 5e-11 >seq159469 Length=1977 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 68690 AAACACTTCCAGACGGCGGTGAAATCCTGCTCTCAGGGCGGTGTTCGCGGCGGCGCTGCT 68749 |||||||| || | || || |||||||| || || ||||| || | || || ||||| Sbjct 1464 AAACACTTTCAAAGTGCCGTAAAATCCTGTTCACAAGGCGGAGTGAGAGGAGGAGCTGCA 1405 Query 68750 ACAGCGTTCTATCCGATCTGGCACTTGGAAGTTGAAAGTCTGCTGGTGCTGAAAAACAAC 68809 || || ||||| || ||||| || |||||||||||| | | || | ||||| || Sbjct 1404 ACTATTTTTTATCCAATATGGCATTTTGAAGTTGAAAGTTTATTAGTTTTAAAAAATAAT 1345 Query 68810 CGTGGCATTGAAGAGAACCGCGTTCGTCATCTCGACTA 68847 | || |||||||| || | || |||||| | || || Sbjct 1344 AGAGGAATTGAAGAAAATAGAGTGCGTCATATTGATTA 1307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 326903782374600