Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq243076 96.9 1e-15 >seq243076 Length=1367 Score = 96.9 bits (106), Expect = 1e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 45488 AAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAAC 45547 ||||||||||| || || ||||| || ||||| | || ||| | | || | ||||| Sbjct 529 AAAGAAGATCGTACAGGTACAGGAACCTTGTCTATTTTTGGCTATAACATGAGATTTAAT 588 Query 45548 TTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTAT 45607 || | | || || || || | ||||| ||||| | ||||| | || || ||| || Sbjct 589 TTAAACAAAGGTTTTCCTCTTCTTACGACAAAAAAATGTCATATTCCATCTATTATTCAT 648 Query 45608 GAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTG 45667 ||| || | |||||||||||||| ||||| ||| || |||| | | | || | Sbjct 649 GAATTGTTATGGTTTTTAAAAGGAGATACTAATATTAGCTACCTTAATAAAAACAAAATA 708 Query 45668 ACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGG 45720 | |||||| | | ||||| |||||| |||| ||| | || ||||| || || Sbjct 709 TCAATTTGGAATAATTGGGCAGATGAATACGGAGATGTTGGTCCAATTTATGG 761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156109195402540