Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq227744 91.5 4e-14 >seq227744 Length=1455 Score = 91.5 bits (100), Expect = 4e-14 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 236 ATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCAGCGCG 295 ||||| || ||||| || |||| ||| || || ||||| || | ||||| | || Sbjct 412 ATTTCTGTAGTGTAACGTTCAAGTCCATTTTGATCTTGCCATTTTCTAGTTTGTAACGAT 353 Query 296 CCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAGCTTT 355 |||||||| | || | ||||| || || || | || || |||||||| | ||| Sbjct 352 CCTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCAGCAATTTCTGCTAATTTT 293 Query 356 CCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGCTTATCC 415 || || | || | || |||||||| ||||||||||| || ||||| || | ||||| Sbjct 292 CCAAATAAAACTATTCGATGCCATTCTGTTTTTTCTTTATTTTCCCCAGTGTTTTTATCT 233 Query 416 TTCCAGGTTTCAGACGTGGC 435 ||||| |||| || || || Sbjct 232 TTCCAATTTTCTGAAGTAGC 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133992907987660