Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq107321 86.0 2e-11 >seq107321 Length=2628 Score = 86.0 bits (94), Expect = 2e-11 Identities = 114/157 (73%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 443716 TCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGG 443775 ||||||| ||| |||||||| | || || |||||| || || |||| |||||| Sbjct 1150 TCGCTTTCGCTTGCGTCGAAGGTATCTTCTTCTCCGGCAGTTTCTGCG-CCATATTCTGG 1208 Query 443776 TTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGAC 443835 | ||||| || || ||||||| || || || || |||||| ||||| || ||| Sbjct 1209 CTCAAAAAACGAGGGCTTATGCCAGGGCTAACATTCTCGAACGAATTGATCTCGCGAGAC 1268 Query 443836 GAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 ||||||||||| || |||||||| || | || |||| Sbjct 1269 GAGGGTTTGCACTGTGACTTCGCGTGCTTGCTTTACA 1305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1570506675258950