Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq15762 100 1e-16 >seq15762 Length=6304 Score = 100 bits (110), Expect = 1e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAA-TTAATATTGTTTGAACCAATAAAATT 65145 ||||| ||||| || ||| |||| | || || || || || || |||| ||| || Sbjct 1345 CGTGTACCAAATTGGCCACTTGGG-TAAAGAAGGTTGATGTTATTGCTGCCAACAAAGTT 1403 Query 65146 CTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAATG 65205 |||||||| || || || | | | ||| |||||||| || |||||| |||| || Sbjct 1404 TTGAGCCATGCCAATGATGGTCCCCACAAGACTTGCTTCACCATGGTGATATGCTGAGTG 1463 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTC 65244 |||||||||||||||||| |||||||| ||||||| ||| Sbjct 1464 TTCAGAGACATATCCACTGAATTGAGCGACTTTTACTTC 1502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233163505441500