Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lactuca_20sativa_20[genbank_20GCA_5F000227445.1_202011-10-04] 876,110 sequences; 1,133,657,130 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq3554 82.4 6e-11 >seq3554 Length=9431 Score = 82.4 bits (90), Expect = 6e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 118546 TGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCC 118605 || ||||||||| | |||||||| || |||| ||||| |||||||| || ||| Sbjct 3404 TGTGCAATCATGCAAGTCAACAACGCATATGAAGCTATGTTAAACGGAACACCAAGTCCC 3345 Query 118606 ATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACT 118663 ||||| ||||||||||| |||| ||| ||||| | ||| || | |||||||||| Sbjct 3344 ATGTCAGCTGATCTCTGATACATTTGACAAGATAACTCTCCTTCATTTACATAAAACT 3287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410051186406040