Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq157809 414 4e-111 seq106406 361 2e-95 >seq157809 Length=287 Score = 414 bits (458), Expect = 4e-111 Identities = 264/287 (92%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 12706 AGGCGAACGAGGATGCAGCGAAGGCTCAGGCCTTCCGTGCAACGCTCAATGAATCGAACG 12765 |||||||||||||||| |||||||||||||| ||| |||||||||| || |||||||||| Sbjct 287 AGGCGAACGAGGATGCTGCGAAGGCTCAGGCATTCAGTGCAACGCTTAACGAATCGAACG 228 Query 12766 CAACTGCTCGGGCAGGATTTGCGATTGATCTGGCCGGATCGGGCAGCGGCGACAAGCTGA 12825 ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| Sbjct 227 TAACTGCTCGGGCAGGATTTGCGATTGAACTGGCAGGATCGGGAAGCGGCGACAAGCTGA 168 Query 12826 GGGAGCGACTGCGCGCAGACCTGGAGATCCAGCAGGATTACAACAAACAGCTTGCCGATC 12885 | ||||||||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||| Sbjct 167 GAGAGCGACTGCGGGCAGATCTGGAAATCCAGCAGGACTACAATAAACAGCTTGCCGATC 108 Query 12886 TACAGAAGCAGTTCAACAGCGCAGAAATCAGCAAGGAACTCTACGACCAAGAAACTGACC 12945 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 107 TCCAGAAGCAGTTCAACAGTGCAGAAATCAGCAAGGAACTCTACGACCAAGAAACTGATC 48 Query 12946 TTCTGCGCCAGGCTCTCGCTGAGCGTCTGGAAATCCAGCATGAGTAC 12992 | |||||||||||| | || ||||| ||||||||||||||||||||| Sbjct 47 TCCTGCGCCAGGCTTTGGCCGAGCGCCTGGAAATCCAGCATGAGTAC 1 >seq106406 Length=233 Score = 361 bits (400), Expect = 2e-95 Identities = 220/233 (94%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 17805 ATATGCGGAGAAGACCATTAAGCGCGGCGTGATCTCTGCGGCCCGAGACGAGCCAAGGAC 17864 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct 233 ATATGCGGAGAAGACGATCAAGCGCGGCGTGATCTCTGCGGCACGAGACGAGCCCAGGAC 174 Query 17865 CACATTCGGGCACATGTACTCGCCGCAGAACATGGATGGTCCACTGAGGATCAGCATCAG 17924 ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 173 CACGTTCGGGCACATGTACTCGCCGCAGAACATGGATGGCGTACTGAAGATCAGCATCAG 114 Query 17925 CGCGCCGTCTGAGGACGACTACGACGGCGTCGATGTAGAGTTCGTCAATGCCAACGGCTG 17984 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 113 CGCGCCGTCTGAGGACGACTACGACGGCGTCGATGTTGAGTTCGTCAATGCCAACGGCTG 54 Query 17985 GATCGAAGATACCGTCCAGTGCCGCCTGCCCGGCGATGTTGGCAGGAAGGTCG 18037 ||||||||||||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct 53 GATCGAAGATACCGTTCAGTGCCGCCTTCCCGGCGATGTCGGCAGGAAGGTCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 179787823092672