Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_002661.2 Length=42942 Score E Sequences producing significant alignments: (Bits) Value seq224806 91.5 4e-14 >seq224806 Length=425 Score = 91.5 bits (100), Expect = 4e-14 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 39842 AAATAAGAGGTGTAACACCTCGTAACGATTTACTAAATGTTAATGTATCAGCAGAAATAA 39901 |||| ||||| || |||||| | ||||||||| |||||| ||| || | | | || | | Sbjct 191 AAATTAGAGGCGTGACACCTAGAAACGATTTATTAAATGCTAACGTTACTGGACAACTCA 132 Query 39902 ATATCAATTATCGCTTATCTGAATTAGGTTTTATTACTAATAAAAATGATATGGA 39956 || | |||||| | ||| || ||||||||||| |||| |||||| |||||||| Sbjct 131 ATTTAAATTATAGATTAATCGAGTTAGGTTTTATAACTAGTAAAAAGGATATGGA 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136795360040576