Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq230622 84.2 2e-11 >seq230622 Length=445 Score = 84.2 bits (92), Expect = 2e-11 Identities = 187/276 (68%), Gaps = 10/276 (4%) Strand=Plus/Minus Query 22328 ACCCACATTTGTGGGCCATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGG 22387 |||| || | |||| |||||||||||||||| || || || ||||||| ||||| | Sbjct 275 ACCCTCAAATTTGGGAGATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAAG 216 Query 22388 TGGATCTTAGTACTGATGTACGCCATTGG-ACAGAAAAACTGACCGAGGCTGAGCGCAGG 22446 | ||||| ||| | ||||||||| | |||| |||| | ||| | Sbjct 215 TCGATCTCTCACAGGATCTTCGCCATTGGGAGTCCTTAACTC-CCGACGAGAAGCAC--- 160 Query 22447 TTCATGTCTCACATACTGGCATTCTTTGCAATGGCAGATGGCATTGTAGGCGACAACCTT 22506 ||||| ||||| | || || |||||||| | ||||||||||| || || ||| Sbjct 159 TTCATCACTCACGTGCTTGCCTTCTTTGCTGCATCTGATGGCATTGTTTTGGAGAATCTT 100 Query 22507 GTGTGCAATTTCGCAAAAGAACTTGACTATATTC-CAGAAGCCAGAGCTTTCTATGGGTT 22565 | | |||| |||||| || | | || | ||||||||||| || ||||| || Sbjct 99 GCTGGACGTTTCATGAAAGAAGTTCA----AGTCTCTGAAGCCAGAGCCTTTTATGGATT 44 Query 22566 TCAGGTGGCAATGGAAAATATACATGCTGAAATGTA 22601 ||| | || || |||||||| || |||| ||||| Sbjct 43 TCAAATCGCCATTGAAAATATCCACTCTGAGATGTA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354908926656136