Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq230622 84.2 2e-11
>seq230622
Length=445
Score = 84.2 bits (92), Expect = 2e-11
Identities = 187/276 (68%), Gaps = 10/276 (4%)
Strand=Plus/Minus
Query 22328 ACCCACATTTGTGGGCCATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGG 22387
|||| || | |||| |||||||||||||||| || || || ||||||| ||||| |
Sbjct 275 ACCCTCAAATTTGGGAGATGTACAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAAG 216
Query 22388 TGGATCTTAGTACTGATGTACGCCATTGG-ACAGAAAAACTGACCGAGGCTGAGCGCAGG 22446
| ||||| ||| | ||||||||| | |||| |||| | ||| |
Sbjct 215 TCGATCTCTCACAGGATCTTCGCCATTGGGAGTCCTTAACTC-CCGACGAGAAGCAC--- 160
Query 22447 TTCATGTCTCACATACTGGCATTCTTTGCAATGGCAGATGGCATTGTAGGCGACAACCTT 22506
||||| ||||| | || || |||||||| | ||||||||||| || || |||
Sbjct 159 TTCATCACTCACGTGCTTGCCTTCTTTGCTGCATCTGATGGCATTGTTTTGGAGAATCTT 100
Query 22507 GTGTGCAATTTCGCAAAAGAACTTGACTATATTC-CAGAAGCCAGAGCTTTCTATGGGTT 22565
| | |||| |||||| || | | || | ||||||||||| || ||||| ||
Sbjct 99 GCTGGACGTTTCATGAAAGAAGTTCA----AGTCTCTGAAGCCAGAGCCTTTTATGGATT 44
Query 22566 TCAGGTGGCAATGGAAAATATACATGCTGAAATGTA 22601
||| | || || |||||||| || |||| |||||
Sbjct 43 TCAAATCGCCATTGAAAATATCCACTCTGAGATGTA 8
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354908926656136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |