Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq280556 113 3e-20 >seq280556 Length=777 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 |||||| || || || || |||||||| ||||||||| ||| | |||| || Sbjct 552 CACCAAGTGAAGTGTCGATTCCTTTTGAATGTTATAATCGGCTAAAGTCCTGCCATCTTC 611 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 |||||| || || || || || |||| ||| ||||| | || | |||||||||||| Sbjct 612 CAATTGCTTCCCAGCGAAAATTAACCTTTGTTGGTCTGGTGGGATCCCTTCTTTATCTTG 671 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 || || ||| || || ||| |||||||| ||| || || | || |||||||| Sbjct 672 GATCTTAGCTTTAACGTTATCAATAGTATCTGAACTCTCAACTTCCAAAGTGATTGTTTT 731 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || ||||| ||||||||||| |||||||| Sbjct 732 TCCTGTTAAGGTCTTCACAAAAATTTGCAT 761 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353458340868576