Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq270693 143 4e-30 >seq270693 Length=669 Score = 143 bits (158), Expect = 4e-30 Identities = 177/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||||||||||||||| || ||||| ||||| || ||||| || || | Sbjct 263 GAGACAACATCCAAGGAATCACCAAGCCGGCCATCCGCCGTCTTGCCCGTCGAGGCGGTG 204 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| || || || |||| || || | ||| | ||| | ||||||||||| Sbjct 203 TAAAGCGTATCAGCGGCCTGATCTACGAGGAAACTCGCGGCGTTCTCAAGATCTTCCTGG 144 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | || || || ||| || ||||||||| || ||||||||||| Sbjct 143 AGAATGTCATTCGCGACGCCGTCACCTACACTGAGCACGCTCGCCGGAAGACTGTCACAG 84 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 ||||||| |||| || || | || | ||||| || | | ||||| |||||| ||| Sbjct 83 CCATGGACGTCGTGTACGCGCTCAAGAGGCAAGGTCGCACTCTCTATGGCTTTGGAGGTT 24 Query 16698 AA 16699 || Sbjct 23 AA 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78796233962616