Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_007053.1 Length=43095 Score E Sequences producing significant alignments: (Bits) Value seq224806 104 6e-18 >seq224806 Length=425 Score = 104 bits (114), Expect = 6e-18 Identities = 232/343 (68%), Gaps = 13/343 (4%) Strand=Plus/Minus Query 22944 CAAGACATGTATCAAGATACAGCATACGGTGTTAATGTAGGTAATAAAAAAGATTATGGC 23003 |||||| ||||||||||||| ||| || ||||||||| | |||||| || Sbjct 414 CAAGACTTGTATCAAGATACGCTATATGGACAACGTGTAGGTAACTATTCAGATTACGGT 355 Query 23004 TTATATTGGGTTAAATCACAGGGGTA---TGACATTGTTCTAGAAATACATTTAGACGCA 23060 ||||||||||||||| | | | | ||| | || ||||| | || ||||| || Sbjct 354 TTATATTGGGTTAAAAAGAACGTGAAACCTGATGTGATTGTAGAATTCCACTTAGATGCT 295 Query 23061 GCAGGAGAAAGCGCAAGTGGTGGGCATGTTATTATCTCAAGTCA---ATTCAATGCAGAT 23117 || | | |||||||| || ||||| ||| | ||| | || |||||| Sbjct 294 GCTAGTCCACAAGCAAGTGGCGGACATGTCATTGT---AAGCGACAGATATCCTGCAGAC 238 Query 23118 ACTATTGATAAAA--GTATACAAGATGTTATTAAAAATAACTTAGGACAAATAAGAGGTG 23175 ||| || ||| |||| | || | | | || | | || |||| ||||| | Sbjct 237 GATATAGACAAAGCGGTAT-CTAGC-GCTCTAGGTAAGACAGTTGGCAAAATTAGAGGCG 180 Query 23176 TAACACCTCGTAACGATTTACTAAATGTTAACGTATCAGCAGAAATAAATATAAATTATC 23235 | |||||| | ||||||||| |||||| |||||| | | | || | ||| |||||||| Sbjct 179 TGACACCTAGAAACGATTTATTAAATGCTAACGTTACTGGACAACTCAATTTAAATTATA 120 Query 23236 GCTTATCTGAATTAGGTTTTATCACTAATAAAAATGATATGGA 23278 | ||| || ||||||||||| |||| |||||| |||||||| Sbjct 119 GATTAATCGAGTTAGGTTTTATAACTAGTAAAAAGGATATGGA 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137283186119408