Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq57770 145 2e-29 >seq57770 Length=4376 Score = 145 bits (160), Expect = 2e-29 Identities = 203/285 (71%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 218517 TGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCC 218576 ||||||| || |||||||||| || | || || | |||| | | | |||||||| Sbjct 1988 TGACTTCGTCAACAAGGAGCTTATATTATTTTCCATGGCTGATTTACAAAGGTCTATTCC 1929 Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636 | |||| |||||||| ||||| || | |||||||| || | |||||| | Sbjct 1928 CTCAATGGTTGATGGCCTTAAGCCTGGCCAAAGGAAGATCCTTTTCTGTTCTTTCAAGAG 1869 Query 218637 GAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGG 218696 |||| | | ||||| ||||| |||| ||||| ||||| ||||| || |||| Sbjct 1868 GAACTTTATCAAAGAAGCAAAGGTTTCTCAATTTTCCGGTTACGTATCTGAGCACTCTGC 1809 Query 218697 CTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGT 218756 || ||||| |||||||||||||| || |||| | || ||||||||||||| ||| Sbjct 1808 TTATCATCATGGTGAGCAGAGTCTTGCTAGTACCATCATTGGAATGGCACAGGACTTTGT 1749 Query 218757 GGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGG 218801 |||||||||||||| || | || || || || || |||||||| Sbjct 1748 CGGCAGTAACAACATTAATCTTCTTCTACCAAATGGACAGTTTGG 1704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1023818731559192