Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq57770 145 2e-29
>seq57770
Length=4376
Score = 145 bits (160), Expect = 2e-29
Identities = 203/285 (71%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 218517 TGACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCC 218576
||||||| || |||||||||| || | || || | |||| | | | ||||||||
Sbjct 1988 TGACTTCGTCAACAAGGAGCTTATATTATTTTCCATGGCTGATTTACAAAGGTCTATTCC 1929
Query 218577 CAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCG 218636
| |||| |||||||| ||||| || | |||||||| || | |||||| |
Sbjct 1928 CTCAATGGTTGATGGCCTTAAGCCTGGCCAAAGGAAGATCCTTTTCTGTTCTTTCAAGAG 1869
Query 218637 GAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGG 218696
|||| | | ||||| ||||| |||| ||||| ||||| ||||| || ||||
Sbjct 1868 GAACTTTATCAAAGAAGCAAAGGTTTCTCAATTTTCCGGTTACGTATCTGAGCACTCTGC 1809
Query 218697 CTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGT 218756
|| ||||| |||||||||||||| || |||| | || ||||||||||||| |||
Sbjct 1808 TTATCATCATGGTGAGCAGAGTCTTGCTAGTACCATCATTGGAATGGCACAGGACTTTGT 1749
Query 218757 GGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGG 218801
|||||||||||||| || | || || || || || ||||||||
Sbjct 1748 CGGCAGTAACAACATTAATCTTCTTCTACCAAATGGACAGTTTGG 1704
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1023818731559192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |