Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq273947 98.7 2e-15
>seq273947
Length=700
Score = 98.7 bits (108), Expect = 2e-15
Identities = 167/238 (70%), Gaps = 7/238 (3%)
Strand=Plus/Plus
Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677
|| || |||||| | ||||| ||||||||||||| || |||||| | || ||||||||
Sbjct 77 GCAATCGAGACGGTCCCCTGTGTCAAGAAGAAGGCTGATTGGGCGTTAAAGTGGATCGAC 136
Query 42678 AGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTC 42737
|| | || | | |||| | |||| | | | || ||| | || || || ||||||
Sbjct 137 AG-CACG--GAATCGTTTGCCGAGCGTATTTTGGCATTTGCTTGTGTTGAAGGAATCTTC 193
Query 42738 TTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG--TCGATGCCCGGAC 42795
||||| || |||| |||||| |||||| | || | || ||| | ||||| ||||
Sbjct 194 TTCTCAGGTAGCTTCTGCTCCATTTTCTGGTTGAA--AAAACGTGGATTAATGCCTGGAC 251
Query 42796 TCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTG 42853
|||| ||||| || || | || | |||||||| || ||| | || ||||| ||
Sbjct 252 TCACATTCTCAAATGAGTTGATTTCACGAGACGAGGGTCTTCATTGCGATTTTGCTTG 309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 940737584725120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |