Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq273947 98.7 2e-15 >seq273947 Length=700 Score = 98.7 bits (108), Expect = 2e-15 Identities = 167/238 (70%), Gaps = 7/238 (3%) Strand=Plus/Plus Query 42618 GCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAG 42677 || || |||||| | ||||| ||||||||||||| || |||||| | || |||||||| Sbjct 77 GCAATCGAGACGGTCCCCTGTGTCAAGAAGAAGGCTGATTGGGCGTTAAAGTGGATCGAC 136 Query 42678 AGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTC 42737 || | || | | |||| | |||| | | | || ||| | || || || |||||| Sbjct 137 AG-CACG--GAATCGTTTGCCGAGCGTATTTTGGCATTTGCTTGTGTTGAAGGAATCTTC 193 Query 42738 TTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTG--TCGATGCCCGGAC 42795 ||||| || |||| |||||| |||||| | || | || ||| | ||||| |||| Sbjct 194 TTCTCAGGTAGCTTCTGCTCCATTTTCTGGTTGAA--AAAACGTGGATTAATGCCTGGAC 251 Query 42796 TCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTG 42853 |||| ||||| || || | || | |||||||| || ||| | || ||||| || Sbjct 252 TCACATTCTCAAATGAGTTGATTTCACGAGACGAGGGTCTTCATTGCGATTTTGCTTG 309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 940737584725120