Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_010147.1 Length=43011 Score E Sequences producing significant alignments: (Bits) Value seq178946 221 3e-53 >seq178946 Length=318 Score = 221 bits (244), Expect = 3e-53 Identities = 173/206 (84%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 7379 aaacggaaactaataaaaaactaaaaaGGACGGTATTTAATTATGAACTTCAATTTAAAT 7438 |||||||||||||||||||| |||||||||||| | ||||||||||||||||||||| Sbjct 205 AAACGGAAACTAATAAAAAAT--AAAAGGACGGTAATCAATTATGAACTTCAATTTAAAC 148 Query 7439 TTACAAGGCGCACAAGAATTAGGGAATTATATGCAACCAGGATCATACAGTGTaaaaatc 7498 |||||| ||| ||| ||||||| || |||||||||||||| ||||||||| ||| | Sbjct 147 TTACAAAACGCTCAAAAATTAGGTAACTATATGCAACCAGGTCAATACAGTGTGAAAGTA 88 Query 7499 aaaaacttcgaaagtaaaaattcgaaaaaCGGACATCCACAATTTGCAATCACGTTTATT 7558 |||||||||||||||||||| || ||||| || || || ||||||| || || || | | Sbjct 87 AAAAACTTCGAAAGTAAAAACTCTAAAAATGGTCACCCTCAATTTGTTATTACATTCACT 28 Query 7559 CATAAAGAAGAAGGCGAATTCACTCA 7584 || ||||||||||| || |||||||| Sbjct 27 CACAAAGAAGAAGGAGACTTCACTCA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137015360036912