Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq279770 125 7e-24
seq281289 116 4e-21
seq44495 114 1e-20
seq281664 105 7e-18
seq48980 104 2e-17
seq21568 104 2e-17
seq230622 102 8e-17
>seq279770
Length=767
Score = 125 bits (138), Expect = 7e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||||||||| ||||| |||||||| |||||| |||| || || | |
Sbjct 182 ATGCAAATCTTCGTAAAAACCCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGCTCA 241
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | ||| || | || |||||||| ||||| ||||||||
Sbjct 242 GACACAATTGACAATGTAAAGGCAAAGATTCAAGATAAAGAGGGCATTCCACCCGACCAA 301
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| |||| || | || || || || || || |||| || || || ||| |||||
Sbjct 302 CAGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGACGGCCGAACGCTTGCCGATTACAAT 361
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
||||| |||||| | || || |||||||||||
Sbjct 362 ATCCAGAAGGAATCTACACTCCATTTGGTGCT 393
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||||||||| || || || || || ||||||||||| || | || || || |
Sbjct 410 ATGCAAATATTTGTGAAGACCCTTACTGGCAAAACCATTACTCTTGAGGTGGAAAGTTCT 469
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || | ||||||| ||||| ||||| || || | || |||
Sbjct 470 GATACAATTGACAATGTCAAGGCTAAAATCCAAGACAAGGAGGGTATCCCACCTGATCAA 529
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || |||| || || || ||||| || |||| || || ||| |||||||||
Sbjct 530 CAGAGACTGATTTTTGCTGGTAAGCAGCTTGAGGACGGTCGAACTCTCGCCGACTACAAT 589
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || |||||| | || ||||||||||| || |||
Sbjct 590 ATTCAGAAGGAATCTACCCTGCATTTGGTTCTTCGT 625
>seq281289
Length=787
Score = 116 bits (128), Expect = 4e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
||||||||| ||||| ||||| ||||| || |||||||||||| | || || || | |
Sbjct 553 AATGCAAATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCTTAGAGGTGGAAAGCTC 612
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | | | || | || |||| || ||||||||||| ||| | |||||
Sbjct 613 TGATACCATCGATAATGTGAAGGCTAAGATCCAAGATAAAGAGGGAATCCCCCCTGACCA 672
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | || |||| ||| || ||||| || || || | ||||| | ||||||||
Sbjct 673 GCAGAGACTAATTTTCGCTGGTAAACAACTTGAAGATGGCCGCACTTTGGCGGACTACAA 732
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || |||||| | || ||||||||||||| |||
Sbjct 733 TATTCAGAAGGAATCAACATTGCATTTGGTGCTCCGT 769
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| ||||| |||||||| || ||| | || || || |
Sbjct 326 ATGCAAATCTTTGTGAAAACTCTCACCGGCAAAACAATAACCCTTGAGGTGGAAAGTTCT 385
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || | ||||| | || ||||||||||| || | |||||
Sbjct 386 GATACTATTGACAATGTGAAGGCCAAAATTCAGGATAAAGAGGGAATCCCTCCAGACCAG 445
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| |||| |||| || || || ||||| || || | || |||||| ||| || |||
Sbjct 446 CAAAGGCTTATTTTTGCTGGAAAGCAGCTCGAGGATGGTCGAACCCTCGCCGATTATAAC 505
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTT 38461
|| ||||| ||| | || || || |||||||| |||||
Sbjct 506 ATACAAAAAGAATCAACCCTTCACTTGGTGCTCCGTTT 543
>seq44495
Length=1402
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || || || || |||||||||||| |||| || || || |
Sbjct 1374 ATGCAAATTTTCGTAAAGACCCTGACAGGTAAAACCATCACCCTCGAGGTTGAATCCTCT 1315
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| |||| | ||| |||| ||||| ||||| |||||| | |||||
Sbjct 1314 GATACCATCGATAACG-TTAAGGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 1256
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| | || || | ||| || || || || || || | || ||||| ||| || ||
Sbjct 1255 GCAAAGACTTATCTTCGCCGGGAAGCAACTAGAGGATGGTCGTACCCTTGCCGATTATAA 1196
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| |||| || || | ||| |||||
Sbjct 1195 CATCCAGAAGGAGTCGACTCTTCACCTTGTGTTGCGT 1159
>seq281664
Length=792
Score = 105 bits (116), Expect = 7e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| ||||| || || ||||||||| | || || ||| | |
Sbjct 776 ATGCAAATTTTTGTCAAAACTCTCACCGGAAAGACCATCACCTTGGAGGTTGAGTCTTCA 717
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||| || || || ||| | |||||
Sbjct 716 GACACAATTGACAACG-TGAAGGCCAAGATTCAGGACAAGGAAGGTATCCCCCCAGACCA 658
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||| | ||||| | ||| || |||||| |||| |||| || || || ||||||||
Sbjct 657 ACAGAGACTCATCTTCGCTGGAAAACAGTTGGAGGACGGCCGAACTCTTGCAGACTACAA 598
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| | || || ||| | || |||||
Sbjct 597 CATCCAGAAGGAGTCTACTCTCCATCTTGTCTTGCGT 561
>seq48980
Length=3483
Score = 104 bits (114), Expect = 2e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| |||||||| || || || ||||| || |||| ||||||
Sbjct 821 AATATGCAGATCTTCGTGAAAACGCTTACCGGGAAGACCATAACTCTCGAGGTCGAGAGT 880
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| || | | | | | | || | ||| || | || || |||||||| || | |||
Sbjct 881 TCTGATACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGAATACCGCCGGAC 940
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| ||||||| ||| || || ||| |||| || | || || || |||||||
Sbjct 941 CAGCAGCGTCTCATTTTCGCCGGTAAGCAGATGGAGGATGGTCGAACACTTGCCGACTAC 1000
Query 38421 AACATCCAAAAGGAAGCGACGCTGCAT 38447
|||||||| ||||| | ||||| |||
Sbjct 1001 AACATCCAGAAGGAGTCCACGCTCCAT 1027
>seq21568
Length=652
Score = 104 bits (114), Expect = 2e-17
Identities = 156/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| || || | || ||||| |||||||| | || || || |
Sbjct 538 AATGCAGATTTTCGTGAAGACATTGACTGGCAAGACCATCACTTTGGAAGTAGAAAGTTC 479
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
||||| | | | || | | |||| ||| || | |||||||||||||| || | |||
Sbjct 478 CGACACCATCGACAATG--TGAAGACAAAGATTCAAGACAAAGAGGGAATCCCACCTGAC 421
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||| |||| || | || ||||| || ||||| || | | || || || |||
Sbjct 420 CAGCAGAGGCTGATCTTTGCAGGCAAGCAACTGGAAGATGGCAGAACTCTAGCAGATTAC 361
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||||||| | || |||||||||||||| ||
Sbjct 360 AACATCCAAAAGGAATCAACTCTGCATTTGGTGCTTCG 323
>seq230622
Length=445
Score = 102 bits (112), Expect = 8e-17
Identities = 177/256 (69%), Gaps = 1/256 (0%)
Strand=Plus/Plus
Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248
||||| || ||||| | || || |||||||||||||| || |||||| | || ||
Sbjct 8 TACATCTCAGAGTGGATATTTTCAATGGCGATTTGAAATCCATAAAAGGCTCTGGCTTCA 67
Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308
|| || ||||||| |||||| | | ||||| || || ||||| ||
Sbjct 68 GAGACTTGAACTTCTTTCATGAAACGTCCAGCAAGATTCTCCAAAACAATGCCATCAGAT 127
Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCC 133368
|| || || ||||| |||||||| ||||||| || ||||| | | ||| ||||
Sbjct 128 GCAGCAAAGAAGGCAAGCACGTGAGTGATGAAGTGCTTCTCGTCGGGAGTTAAGGACTCC 187
Query 133369 CAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428
|| | ||| |||| || || || || |||||| ||||||| || || || |||||
Sbjct 188 CAATGGCGAAGATCCTGTGAGAGATCGACTTCCTCGGCGGTCCAGAAGGAAGCTTCGGCC 247
Query 133429 TTTTTGTACATACTCC 133444
|| |||||||| ||||
Sbjct 248 TTCTTGTACAT-CTCC 262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498265190958080
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