Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq58480 141 4e-28 seq281289 131 7e-25 seq280556 127 8e-24 seq17501 111 6e-19 seq60430 109 2e-18 seq279770 104 9e-17 seq281664 95.1 5e-14 seq81485 93.3 2e-13 seq277496 91.5 6e-13 seq54900 86.0 2e-11 >seq58480 Length=2154 Score = 141 bits (156), Expect = 4e-28 Identities = 371/559 (66%), Gaps = 8/559 (1%) Strand=Plus/Plus Query 451967 GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 || ||| | || || ||||| | || ||||||||||||||||| ||||| ||||| || Sbjct 856 GGCAAAGAGCTTTGCAAGAGTATCAACCCTGATGAAGCTGTTGCCTATGGAGCTGCTGTC 915 Query 452027 CAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGAT 452086 ||||| || ||| | | ||| | | | || || | |||| ||||| | | ||| Sbjct 916 CAAGCTGCCATTTTGAGCGGTGAGGGTAACGAGAAGGTTCAAGATCTTCTGCTTTTGGAT 975 Query 452087 GTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAA 452146 || || ||||| || |||||| |||||||||| || || | |||||| || ||| Sbjct 976 GTTACCCCTCTTTCCCTTGGACTTGAAACAGCCGGCGGTGTTATGACTGTCTTGATT--C 1033 Query 452147 CGAGGA--ACTTCTATTCCTTGTAA-AAAGAGTCAAACATTTAGTACAGCAAGTGATAAC 452203 | |||| || | || || || ||||| ||| || |||| ||| || Sbjct 1034 CAAGGAATACCACCATCCCCACCAAGAAAGA-ACAAGTTTTCTCTACATACTCTGACAAT 1092 Query 452204 CAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAAT 452263 ||||| ||||| || ||||| | |||||| || | || | || || || || || Sbjct 1093 CAACCTGGTGTTTTGATCCAAGTCTATGAAGGTGAGAGGGCGAGAACTCGCGACAACAAC 1152 Query 452264 AAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATT 452323 || || ||||| || || || ||||| ||||| || |||||| || Sbjct 1153 TTGCTTGGTAAATTTGAGCTCTCTGGAATCCCTCCAGCTCCAAGAGGTGTTCCTCAGATC 1212 Query 452324 GAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCA 452383 | | || ||| |||| || || |||||| | ||||| ||| | || ||| | Sbjct 1213 ACAGTCTGCTTTGACATTGACGCCAACGGTATTTTGAATGTTTCTGCTGAGGATAAAACC 1272 Query 452384 TCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGA 452442 | || | | |||| || || ||||| || || || || || || || || ||||| Sbjct 1273 ACCGG-ACAGAAGAACAAGATCACAATCACCAACGACAAGGGGCGGTTGTCGAAGGAAGA 1331 Query 452443 TATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAACAAGTTAGAAA 452502 ||||| || ||||| | |||||||| |||| ||||| ||| |||||| || | || Sbjct 1332 GATTGAGAAGATGGTGCAAGAAGCAGAGAAATACAAGGCTGACGATGAAGAACACAAGAA 1391 Query 452503 ACATGTTGAAGCTAAAAAC 452521 | ||||||||||||||| Sbjct 1392 GAAGGTTGAAGCTAAAAAC 1410 >seq281289 Length=787 Score = 131 bits (144), Expect = 7e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| || ||||||||||| || || | || || ||| || Sbjct 553 AATGCAAATCTTCGTGAAAACCCTCACTGGTAAAACCATCACCTTAGAGGTGGAAAGCTC 612 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| ||| || | | || || || |||||||| || ||||| || ||||| || Sbjct 613 TGATACCATCGATAATGTGAAGGCTAAGATCCAAGATAAAGAGGGAATCCCCCCTGACCA 672 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | |||||||| | || ||||||||||||||||| | ||||||||||| || || Sbjct 673 GCAGAGACTAATTTTCGCTGGTAAACAACTTGAAGATGGCCGCACTTTGGCGGACTACAA 732 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 |||| | ||||| ||||| | || || || Sbjct 733 TATTCAGAAGGAATCAACATTGCATTTGGT 762 >seq280556 Length=777 Score = 127 bits (140), Expect = 8e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || || || | || || ||||| || ||| | || ||||| || Sbjct 762 AATGCAAATTTTTGTGAAGACCTTAACAGGAAAAACAATCACTTTGGAAGTTGAGAGTTC 703 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||||| ||||| || || |||||||| ||||| || || || || || Sbjct 702 AGATACTATTGATAACGTTAAAGCTAAGATCCAAGATAAAGAAGGGATCCCACCAGACCA 643 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||| | ||||||||| | ||||| ||| | |||||||| || ||||| || |||||||| Sbjct 642 ACAAAGGTTAATTTTCGCTGGGAAGCAATTGGAAGATGGCAGGACTTTAGCCGATTATAA 583 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | ||||||||||| || Sbjct 582 CATTCAAAAGGAATCGACACTTCACTTGGT 553 >seq17501 Length=1722 Score = 111 bits (122), Expect = 6e-19 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || ||||||||||| ||||||||||| |||||||| | || ||||| || ||||| Sbjct 1154 GCTGTGATTACTGTTCCAGCTTATTTCAACGATGCACAGAGACAGGCAACAAAGGATGCT 1213 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || ||||||||||| |||||||| ||||||| ||||| || || || ||||| || Sbjct 1214 GGCAGGATTGCTGGTTTGGATGTTCTTAGAATTATCAATGAGCCCACTGCTGCTGCACTT 1273 Query 451442 GCATATGGA 451450 | |||||| Sbjct 1274 TCTTATGGA 1282 >seq60430 Length=1983 Score = 109 bits (120), Expect = 2e-18 Identities = 266/401 (66%), Gaps = 9/401 (2%) Strand=Plus/Minus Query 451211 GTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTT 451270 || || || ||||||||| || |||||||| || || ||||| ||||||||| | Sbjct 1569 GTTAACTACAAAGGTGAAGAGAAGCAGTTTGCTCCGGAGGAGATTTCTTCTATGGTTTTG 1510 Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 ||||| |||||||||| || ||| | ||| || | | | | || ||| || Sbjct 1509 ACTAAGATGAAAGAAATCGCGGAAGCTTTTATAGGGCAAACTATCAAGAACGCTGTAGTT 1450 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || || || ||||||||||||||| |||| | ||||| || || ||||| || |||| Sbjct 1449 ACAGTACCTGCTTATTTCAATGATTCACAGAGACAAGCGACGAAGGATGCGGGTGCTATT 1390 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| | || || | || || || || || || || || || || | || ||||| Sbjct 1389 GCTGGACTCAACGTGATGCGTATCATCAACGAGCCAACGGCGGCGGCGATTGCGTATGGT 1330 Query 451451 CTAGGAAAATCAAAAG------AAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 || ||| || ||| | | || ||| | || | | | || || | || Sbjct 1329 CT-GGACAA--AAAGGCCTCTCGTAGAGGCGAACAGAACGTGCTGATCTTCGACCTCGGC 1273 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCA 451564 || |||||| ||| || | | |||| ||||| ||| | || || || || || Sbjct 1272 GGTGGAACTTTCGATGTGTCGCTTTTGACAATAGAAGAGGGGATTTTCGAGGTCAAAGCC 1213 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || ||||| ||||| || ||||||||| | ||||| Sbjct 1212 ACCGCCGGCGATACACATCTCGGCGGTGAAGATTTCGATAA 1172 >seq279770 Length=767 Score = 104 bits (114), Expect = 9e-17 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112 ||||||| || || || || ||||| ||||| ||||||||||| || ||| |||||| Sbjct 415 AATATTT--GTGAAGACCCTTACTGGCAAAACCATTACTCTTGAGGTGGAAAGTTCTGAT 472 Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172 | ||||| | | || ||||| ||||| ||||| || || || ||||||||||| Sbjct 473 ACAATTGACAATGTCAAGGCTAAAATCCAAGACAAGGAGGGTATCCCACCTGATCAACAG 532 Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232 | | ||||| | || || || ||||| || || ||||| | || || || |||||| Sbjct 533 AGACTGATTTTTGCTGGTAAGCAGCTTGAGGACGGTCGAACTCTCGCCGACTACAATATT 592 Query 391233 GATAAGGATGCAACACTTCACTTAGT 391258 | ||||| | || || || || || Sbjct 593 CAGAAGGAATCTACCCTGCATTTGGT 618 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || ||||| ||||| || || || || || ||| || Sbjct 182 ATGCAAATCTTCGTAAAAACCCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGCTCA 241 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || ||| ||||||||||| || || ||||| || || ||| Sbjct 242 GACACAATTGACAATGTAAAGGCAAAGATTCAAGATAAAGAGGGCATTCCACCCGACCAA 301 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || |||||||| || || |||| | || ||||| ||| Sbjct 302 CAGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGACGGCCGAACGCTTGCCGATTACAAT 361 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | ||||| | ||||| || || || | ||||| Sbjct 362 ATCCAGAAGGAATCTACACTCCATTTGGTGCTTAGACT 399 >seq281664 Length=792 Score = 95.1 bits (104), Expect = 5e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || ||||| || || || || || | || || || || Sbjct 321 AATGCAGATCTTTGTCAAGACCCTGACAGGGAAGACCATCACCTTGGAGGTGGAGAGTTC 262 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||||| || || | |||| |||||| || || ||||||||||||||||| || || Sbjct 261 TGATACAATCGACAATGTTAAGGCAAAAATCCAGGACAAGGAAGGAATTCCTCCAGACCA 202 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || || || || || | || || || || ||||||||||| || | || ||||| || Sbjct 201 GCAGCGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGAAGGACCCTTGCTGATTACAA 142 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | ||||| | || |||||| Sbjct 141 CATTCAGAAGGAGTCTACCCTTCAC 117 >seq81485 Length=213 Score = 93.3 bits (102), Expect = 2e-13 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| || || || || || || || ||||| ||||| |||||| Sbjct 58 ATGCAAATCTTCGTTAAAACCCTAACCGGCAAGACCATCACCCTTGAGGTTGAGTCATCT 117 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | || || || || || |||||||||||||| ||||| || Sbjct 118 GATACGATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGACCAG 177 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGAT 391205 |||||| | || ||| | || || ||||| || ||| Sbjct 178 CAACGTCTCATCTTCGCCGGAAAGCAACTCGAGGAT 213 >seq277496 Length=739 Score = 91.5 bits (100), Expect = 6e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 391137 ATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAA 391196 || || || |||||||| ||||||||||| || || | |||||||| | || || ||| Sbjct 137 ATGCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAGCAA 196 Query 391197 CTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTA 391256 | |||||||| |||| | || |||||||| || | ||||| |||| |||||||| Sbjct 197 TTGGAAGATGGTCGAACGCTTGCAGATTATAACATCCAAAAGGAGTCAACCCTTCACTTG 256 Query 391257 GTATTAAGACTGAGAGGA 391274 || || || || || ||| Sbjct 257 GTCTTGAGGCTTAGGGGA 274 >seq54900 Length=1625 Score = 86.0 bits (94), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 450917 ATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTA 450976 ||||| || ||| | ||||| || | ||| ||||| || || ||| | || ||| ||||| Sbjct 851 ATTGGGATAGATTTGGGAACAACTTATTCTTGTGTTGGAGTCTACAAGAACGGACATGTA 910 Query 450977 GAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACGGAT 451036 ||||||||||| |||||||||||| || | || ||||| ||||| ||| || ||| Sbjct 911 GAAATTATAGCGAATGACCAAGGAAATCGTATCACCCCTTCTTGGGTCGCTTTCACTGAT 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1967994827784096