Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq218924 114 2e-20 seq273947 95.1 1e-14 >seq218924 Length=406 Score = 114 bits (126), Expect = 2e-20 Identities = 194/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||||||||||||||| | || || | |||||| ||| | |||| Sbjct 101 GCAAAATCACAATGAAGCCCTTCATCTCTTGAAATCAACTCATTTGAGAACGTTAATCCA 160 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| || || | ||| |||| ||| || || | || ||||| || || ||||| || Sbjct 161 GGCATTAGCCCACGTTTTTTTAACCAGAAAATAGAGCAGAAACTACCTGAGAAGAAAATT 220 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCAC 119675 ||||| ||||| ||||| || || | |||||||| || | | | |||| | |||| Sbjct 221 CCCTCAACACAAGCGAACGCCAAAATCCGCTCAGCGAACGATTCTGTACTGTCAATCCAC 280 Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGT 119735 || | ||||| | ||||| || | |||||||||||||| || || ||| | Sbjct 281 TTCAACGCCCAATCAGCCTTTTTCTTGACGCAGGGGACAGTTTCAATAGCACGGAATAAC 340 Query 119736 TGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAG 119776 | ||||| ||| |||||| ||||| | |||| ||| Sbjct 341 CGATTCTTCTCAATCGAATCCTTGATATAGGTTTCAAGGAG 381 >seq273947 Length=700 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || |||||| || || || || || || | |||||| ||| |||||| Sbjct 306 GCAAAATCGCAATGAAGACCCTCGTCTCGTGAAATCAACTCATTTGAGAATGTGAGTCCA 247 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | ||| | ||| || | ||| || |||| || || || || || |||||||| Sbjct 246 GGCATTAATCCACGTTTTTTCAACCAGAAAATGGAGCAGAAGCTACCTGAGAAGAAGATT 187 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCAC 119675 || || ||||| || || || || | |||||| ||||| | | | |||||| |||| Sbjct 186 CCTTCAACACAAGCAAATGCCAAAATACGCTCGGCAAACGATTCCGTGCTGTCGATCCAC 127 Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGC 119725 || | ||||| | ||||| || | |||||||| || | ||| || Sbjct 126 TTTAACGCCCAATCAGCCTTCTTCTTGACACAGGGGACCGTCTCGATTGC 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 586729704433600