Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq218924 114 2e-20
seq273947 95.1 1e-14
>seq218924
Length=406
Score = 114 bits (126), Expect = 2e-20
Identities = 194/281 (69%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555
||||| || ||||||||||||||| | || || | |||||| ||| | ||||
Sbjct 101 GCAAAATCACAATGAAGCCCTTCATCTCTTGAAATCAACTCATTTGAGAACGTTAATCCA 160
Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615
||||| || || | ||| |||| ||| || || | || ||||| || || ||||| ||
Sbjct 161 GGCATTAGCCCACGTTTTTTTAACCAGAAAATAGAGCAGAAACTACCTGAGAAGAAAATT 220
Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCAC 119675
||||| ||||| ||||| || || | |||||||| || | | | |||| | ||||
Sbjct 221 CCCTCAACACAAGCGAACGCCAAAATCCGCTCAGCGAACGATTCTGTACTGTCAATCCAC 280
Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGT 119735
|| | ||||| | ||||| || | |||||||||||||| || || ||| |
Sbjct 281 TTCAACGCCCAATCAGCCTTTTTCTTGACGCAGGGGACAGTTTCAATAGCACGGAATAAC 340
Query 119736 TGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAG 119776
| ||||| ||| |||||| ||||| | |||| |||
Sbjct 341 CGATTCTTCTCAATCGAATCCTTGATATAGGTTTCAAGGAG 381
>seq273947
Length=700
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555
||||| || |||||| || || || || || || | |||||| ||| ||||||
Sbjct 306 GCAAAATCGCAATGAAGACCCTCGTCTCGTGAAATCAACTCATTTGAGAATGTGAGTCCA 247
Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615
||||| | ||| | ||| || | ||| || |||| || || || || || ||||||||
Sbjct 246 GGCATTAATCCACGTTTTTTCAACCAGAAAATGGAGCAGAAGCTACCTGAGAAGAAGATT 187
Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCAC 119675
|| || ||||| || || || || | |||||| ||||| | | | |||||| ||||
Sbjct 186 CCTTCAACACAAGCAAATGCCAAAATACGCTCGGCAAACGATTCCGTGCTGTCGATCCAC 127
Query 119676 TTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGC 119725
|| | ||||| | ||||| || | |||||||| || | ||| ||
Sbjct 126 TTTAACGCCCAATCAGCCTTCTTCTTGACACAGGGGACCGTCTCGATTGC 77
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 586729704433600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |