Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq282295 82.4 9e-11 >seq282295 Length=801 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 ||||||||| |||||| || ||||| || |||||||||||||| || || || | Sbjct 541 GAGAATCCTGCTTGGTATACTCAGTACACGCCATATCAAGCTGAGATTTCCCAAGGTCGT 600 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 | ||| |||| | ||||| ||||| | |||||||| || || || | || || | Sbjct 601 CTTGAATCTTTGCTTAATTATCAAACTTTAATCACAGATCTCACTGGTCTTCCCATGTCC 660 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || || || | | ||||||| ||||| || || ||||| ||| Sbjct 661 AATGCTTCATTGCTTGATGAAGGGACTGCTGCCGCTGAAGCTATG 705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577003740302080