Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq218924 98.7 1e-15
seq230622 87.8 2e-12
>seq218924
Length=406
Score = 98.7 bits (108), Expect = 1e-15
Identities = 114/150 (76%), Gaps = 3/150 (2%)
Strand=Plus/Plus
Query 37159 AATATTTAA-ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAAT 37217
|||| | || |||| ||||| |||||||||||||| | ||||||||||| |||||
Sbjct 80 AATAATGAATACAACAAACAAGCAAAATCACAATGAAGCCCTTCATCTCTTGAAATCAAC 139
Query 37218 TCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA 37277
||||| || || |||||||| ||||||| || | |||||| | ||| || || | |||
Sbjct 140 TCATTTGAGAACGTTAATCCAGGCATTAGCCCACGTTTTTTTAACCAGAAAATAG-AGCA 198
Query 37278 -AAAGATCCAGAAAAGAAAATACCTTCAAC 37306
||| || || |||||||| || |||||
Sbjct 199 GAAACTACCTGAGAAGAAAATTCCCTCAAC 228
>seq230622
Length=445
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/145 (74%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 37466 ACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGC 37525
||| ||||| |||||||| ||||||||||| || || ||||| |||||||| || ||
Sbjct 4 ACTGTACATCTCAGAGTGGATATTTTCAATGGCGATTTGAAATCCATAAAAGGCTCTGGC 63
Query 37526 TTCAGATAATTGAACATCGTT-AAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584
|||||| | |||||| || || | |||| || ||| | || || ||| || ||||
Sbjct 64 TTCAGAGACTTGAACTTCTTTCATGAAACGTC-CAGCAAGATTCTCCAAAACAATGCCAT 122
Query 37585 CACTAGCTGCAAAGAAAGCAAGAAC 37609
|| || |||||||| ||||| ||
Sbjct 123 CAGATGCAGCAAAGAAGGCAAGCAC 147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590057762956480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |