Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq279770 161 8e-35
seq281289 152 4e-32
seq280556 134 1e-26
seq281664 114 1e-20
seq126021 114 1e-20
seq21568 100 2e-16
seq277496 86.0 5e-12
>seq279770
Length=767
Score = 161 bits (178), Expect = 8e-35
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| || |||||||| || || |||||||||||||| | |||| | | || ||
Sbjct 390 ACCAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGGCCGTCCTCA 331
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||||||| ||||| || | | |||||| ||||| |||||||| ||||||||||||
Sbjct 330 AGTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGA 271
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| ||| |||||| | || | ||||| || ||||||| || || |||| ||||||
Sbjct 270 ATCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTTTTG 211
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | |||||||| || || |||||
Sbjct 210 CCAGTGAGGGTTTTTACGAAGATTTGCAT 182
Score = 147 bits (162), Expect = 2e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| ||||| ||||||||||| || || |||||||| ||||||| ||||| |
Sbjct 625 ACGAAGAACCAAATGCAGGGTAGATTCCTTCTGAATATTGTAGTCGGCGAGAGTTCGACC 566
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
|| || | |||||||| ||||| |||| | ||||||||| || || || || || ||
Sbjct 565 GTCCTCAAGCTGCTTACCAGCAAAAATCAGTCTCTGTTGATCAGGTGGGATACCCTCCTT 506
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||| ||||| || ||| | || | || ||||| ||||||| |||||||| |
Sbjct 505 GTCTTGGATTTTAGCCTTGACATTGTCAATTGTATCAGAACTTTCCACCTCAAGAGTAAT 446
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||||||| || | || || |||||||| |||||
Sbjct 445 GGTTTTGCCAGTAAGGGTCTTCACAAATATTTGCAT 410
Score = 95.1 bits (104), Expect = 1e-14
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 101340 TCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTT 101399
|||| | |||||| || || |||||||| || ||||||||||| || ||| ||| | |
Sbjct 767 TCAACCTCTGTTGGTCAGGTGGAATGCCCTCCTTATCTTGAATCTTAGCTTTCACATTAT 708
Query 101400 CTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAA 101459
| | || ||||| | |||||||| | ||| | |||||||| || || ||||| ||||
Sbjct 707 CAATTGTATCAGAGCTCTCCACTTCCAAAGTAATTGTTTTGCCAGTCAAGGTTTTCACAA 648
Query 101460 ATATCTGCAT 101469
| ||||||||
Sbjct 647 AAATCTGCAT 638
>seq281289
Length=787
Score = 152 bits (168), Expect = 4e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| || | |||||| | || || |||||||| |||||||||||||| || |||||||
Sbjct 554 TTCCACCACGTAAACGGAGCACCAAGTGAAGGGTTGATTCTTTTTGTATGTTATAATCGG 495
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
||| |||| |||| || | ||||| || ||||| || | | || || || || |
Sbjct 494 CGAGGGTTCGACCATCCTCGAGCTGCTTTCCAGCAAAAATAAGCCTTTGCTGGTCTGGAG 435
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| || || |||||||| |||||||| || ||| | || | ||| ||||| ||||||
Sbjct 434 GGATTCCCTCTTTATCCTGAATTTTGGCCTTCACATTGTCAATAGTATCAGAACTTTCCA 375
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| ||||| || | ||||||||||| | |||||| ||||| || |||||
Sbjct 374 CCTCAAGGGTTATTGTTTTGCCGGTGAGAGTTTTCACAAAGATTTGCAT 326
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| | || ||||| || || |||||||| || || | ||| | | |||| ||
Sbjct 762 ACCAAATGCAATGTTGATTCCTTCTGAATATTGTAGTCCGCCAAAGTGCGGCCATCTTCA 703
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||| ||||| || || || | | ||| || || || || || || |||||||||||
Sbjct 702 AGTTGTTTACCAGCGAAAATTAGTCTCTGCTGGTCAGGGGGGATTCCCTCTTTATCTTGG 643
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || ||| | || | || ||||| ||||||| || | |||| |||||
Sbjct 642 ATCTTAGCCTTCACATTATCGATGGTATCAGAGCTTTCCACCTCTAAGGTGATGGTTTTA 583
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || | ||||| || || || |||||
Sbjct 582 CCAGTGAGGGTTTTCACGAAGATTTGCAT 554
>seq280556
Length=777
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| | | ||| | || || ||||| || ||||| ||||| || || ||||||||
Sbjct 535 CCTCCACGAAGACGCAGCACCAAGTGAAGTGTCGATTCCTTTTGAATGTTATAATCGGCT 594
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| ||| |||| ||||||||||| || || || || || | ||||| || || ||
Sbjct 595 AAAGTCCTGCCATCTTCCAATTGCTTCCCAGCGAAAATTAACCTTTGTTGGTCTGGTGGG 654
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| |||||||||||||| || || ||| || | || | ||| || || | || |||
Sbjct 655 ATCCCTTCTTTATCTTGGATCTTAGCTTTAACGTTATCAATAGTATCTGAACTCTCAACT 714
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| ||||| || ||||| || || ||||| || |||||
Sbjct 715 TCCAAAGTGATTGTTTTTCCTGTTAAGGTCTTCACAAAAATTTGCAT 761
Score = 102 bits (112), Expect = 6e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| ||||| ||||| || ||||| || || | || | |||| |||||||||
Sbjct 331 TGGAGGGTGGATTCCTTTTGAATGTTGTAGTCAGCCAATGTACGTCCATCCTCCAATTGC 390
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || || || |||| | || || || || ||||| || || || || || |||||
Sbjct 391 TTCCCAGCGAAAATCAGTCTTTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTA 450
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | |||||| || | || ||||| | |||| || || || |||
Sbjct 451 GCCTTCACATTGTCGATAGTGTCTGAGCTCTCAACTTCTAATGTGATGGTCTTTCCTGTT 510
Query 101447 AAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482
|| || || |||||||| ||||| | | ||||||
Sbjct 511 AAGGTCTTCACAAATATTTGCATCCCTCCACGAAGA 546
>seq281664
Length=792
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||||||||| || || || || |||||||| || | || || |||| |||| |||
Sbjct 118 TGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCTTCCAGCTGC 177
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| ||||| ||||| || || || ||||| ||||| || || || ||||||
Sbjct 178 TTTCCAGCAAAGATCAACCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCCTGGATTTTT 237
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| | || | || ||||| | ||||| || | |||| || || || ||
Sbjct 238 GCCTTAACATTGTCGATTGTATCAGAACTCTCCACCTCCAAGGTGATGGTCTTCCCTGTC 297
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || ||||| ||||||||
Sbjct 298 AGGGTCTTGACAAAGATCTGCAT 320
>seq126021
Length=250
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || || || ||||| || ||||||||||| | || | |||| || | |||
Sbjct 219 TGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGCTAGTGTACGACCATCTTCGAGCTGC 160
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| |||||||| ||||| | || ||||| || ||||| ||||| || |||||||| ||
Sbjct 159 TTGCCTGCAAAGATCAACCTTTGCTGATCCGGGGGAATACCTTCCTTGTCTTGAATCTTA 100
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| ||| | || | |||||||| |||| ||||| || || | || || || ||
Sbjct 99 GCTTTGACATTGTCGATTGTGTCAGAGCTTTCAACTTCTAGTGTAATAGTCTTCCCCGTG 40
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| ||||| || || || |||||
Sbjct 39 AGCGTTTTGACGAAAATTTGCAT 17
>seq21568
Length=652
Score = 100 bits (110), Expect = 2e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || ||||||||||| || | ||| | |||| ||||||||
Sbjct 113 TGGAGGGTGGACTCTTTCTGAATATTGTAATCAGCCAAAGTCCGACCATCCTCCAATTGT 172
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || ||||| ||||| | ||||||||| || ||||| || || || |||||||| |||
Sbjct 173 TTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATCCCCTCCTTGTCTTGAATCTTT 232
>seq277496
Length=739
Score = 86.0 bits (94), Expect = 5e-12
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || || |||||||| || || ||||| || || ||||| || | |||| ||||
Sbjct 261 AAGACCAAGTGAAGGGTTGACTCCTTTTGGATGTTATAATCTGCAAGCGTTCGACCATCT 202
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
|||||||||||||| ||||| || || | ||| || || || ||||| ||||| || ||
Sbjct 201 TCCAATTGCTTACCAGCAAAAATTAATCTCTGCTGGTCAGGAGGAATACCTTCCTTGTCC 142
Query 101378 TGAAT 101382
|| ||
Sbjct 141 TGCAT 137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394804817964984
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