Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_019448.1 Length=139806 Score E Sequences producing significant alignments: (Bits) Value seq235819 102 7e-17 >seq235819 Length=465 Score = 102 bits (112), Expect = 7e-17 Identities = 114/150 (76%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 28647 TCTGCATTAGCCTTATCATTAATTGATTTATCTTTATGAGGGCTGTAAGGAGTGACTCCT 28706 |||||||||| |||||||||||| ||||| |||| |||||| || ||||| | ||||| Sbjct 465 TCTGCATTAGTCTTATCATTAATAGATTTGTCTTGATGAGGACTATAAGGTTTTACTCCC 406 Query 28707 ACAATACCTTCTACTTGC-TTATGCTGTTTGTCTCTATAATCTACCATAGCTTGGTTAAG 28765 |||| | ||| || | ||||| ||||| || | |||||| ||||| |||| || | Sbjct 405 TCAATTTC-GCTAATTTCATTATGTTGTTTTTCACGATAATCAACCATCGCTTCATTTAA 347 Query 28766 TAGATGACCTCCCATATAAATTACTTTGTC 28795 | ||||||| | | ||||| ||||| || Sbjct 346 AATATGACCTGCTAGGTAAATAACTTTTTC 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445545428648320