Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq299969 120 6e-22
seq230622 102 2e-16
>seq299969
Length=1347
Score = 120 bits (132), Expect = 6e-22
Identities = 193/272 (71%), Gaps = 4/272 (1%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
||||||||||||||| | |||||| || || || ||||| || |||||||| ||||| ||
Sbjct 7 GTACATCTCAGAGTGGATATTCTCGATCGCAATTTGGAATCCATAGAAGGCTCTGGCTTC 66
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542
| ||| || |||||| | ||| | ||| || |||||||| || || ||||| |
Sbjct 67 AGCCACTTGAACTTCTTTCATGAAGC-GTCCGGCGAGATTCTCCAAAACGATGCCATCAG 125
Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602
||||||| ||||||||||| || || | | ||| || ||||| | || | || ||
Sbjct 126 AAGCAGCGAAGAAGGCAAGAACGTGAGTGATGAAGTGTTTCTCGTCGGAAGTTA-AGGAT 184
Query 48603 T-CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661
| ||| | | ||| | || || ||||| || ||||||||||||| ||
Sbjct 185 TCCCAATGGCGAAGGTCCTGTGAGAGATCGACTTCCTCGGCAGTCCAGAAGGAGGCTTCG 244
Query 48662 GCTTTTTTGTACATGCCCCATATGTCCGGATA 48693
||||| |||||||| |||| || | |||||
Sbjct 245 GCTTTCTTGTACATCTCCCAGATTTGAGGATA 276
>seq230622
Length=445
Score = 102 bits (112), Expect = 2e-16
Identities = 111/145 (77%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
||||||||||||||| | ||| || || ||||| || || || || ||||| ||||| ||
Sbjct 7 GTACATCTCAGAGTGGATATTTTCAATGGCGATTTGAAATCCATAAAAGGCTCTGGCTTC 66
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542
| | || || |||||| | ||| | |||||| |||||||| || || ||||| |
Sbjct 67 AGAGACTTGAACTTCTTTCATGAAAC-GTCCAGCAAGATTCTCCAAAACAATGCCATCAG 125
Query 48543 AAGCAGCAAAGAAGGCAAGGACATG 48567
| ||||||||||||||||| || ||
Sbjct 126 ATGCAGCAAAGAAGGCAAGCACGTG 150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 927980027054080
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |