Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_019915.1 Length=40917 Score E Sequences producing significant alignments: (Bits) Value seq208771 82.4 2e-11 >seq208771 Length=379 Score = 82.4 bits (90), Expect = 2e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 28487 TGATAATGCAGAATTACTACTACAAATGATAGAAAATCAACAGAAACAAATAAACGTGTT 28546 |||||||| |||||| ||||||||||||| || | |||||| ||||||| || | || Sbjct 348 TGATAATGATGAATTATTACTACAAATGATTGAGCAACAACAGCAACAAATTAATTTATT 289 Query 28547 AATGGAAATAGCACGAAGTAATA 28569 ||||||||| || ||||||||| Sbjct 288 AATGGAAATTGCTAGAAGTAATA 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130338838408976