Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_020490.2 Length=44714 Score E Sequences producing significant alignments: (Bits) Value seq254897 134 4e-27 >seq254897 Length=556 Score = 134 bits (148), Expect = 4e-27 Identities = 110/134 (82%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 11479 TTTTATAGCAATGTTGACGGCGGTTTTGTGTATTTTGACATATACCAAACAGTGTCTGTA 11538 |||||||||||| |||| || |||| ||||||||| || | | |||| |||| || Sbjct 556 TTTTATAGCAATCTTGATGGTGGTTCTGTGTATTTCGATAAAATTCAAAATTTGTCGATA 497 Query 11539 GAGCATGAAATTGATAAAGATGAAACTTTCACAGTAGAAATTGAAGAAGAAATTACGGAA 11598 ||||||||||||| || | |||||||||||||||||||| | ||||||||||||||| || Sbjct 496 GAGCATGAAATTGCTATAAATGAAACTTTCACAGTAGAAGTCGAAGAAGAAATTACGAAA 437 Query 11599 GAAACAAAAATTCC 11612 ||||| |||||| Sbjct 436 GAAACGGCAATTCC 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142445215018944