Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_021326.1
Length=45242
Score E
Sequences producing significant alignments: (Bits) Value
seq224806 251 2e-62
>seq224806
Length=425
Score = 251 bits (278), Expect = 2e-62
Identities = 309/422 (73%), Gaps = 0/422 (0%)
Strand=Plus/Plus
Query 4423 GGCGCATCAATTTGTCTGCCGTTAATGGCTTCAGCAATCCGCTTCGTGAAGCTGTCTAAA 4482
||||||| ||||| || || || || || || ||||| ||||| || || || ||||
Sbjct 2 GGCGCATTGATTTGCCTACCATTGATAGCCTCTGCAATACGCTTAGTAAAACTATCTAGG 61
Query 4483 TTGTTTTTAATGTAGTTTAAATCTTTCGTAGATGTGATAAAACCTAATTCGATTAAACGA 4542
| | | || |||| | ||| || || || ||||||||||| |||||||| | |
Sbjct 62 TGTGTAGTGATATAGTCCATATCCTTTTTACTAGTTATAAAACCTAACTCGATTAATCTA 121
Query 4543 TAATTAAGATTAAGATCAGCAGACACGTTAGCGTTCAATAAATCCCCTCTAGGTGTCACA 4602
||||| | ||| || | ||| |||||||| || |||||||| ||||||||||||
Sbjct 122 TAATTTAAATTGAGTTGTCCAGTAACGTTAGCATTTAATAAATCGTTTCTAGGTGTCACG 181
Query 4603 CCTCTTATTTTACCCACTGTTTTATCTAATGCACTACTTAATGCCTTGTCAATGTCATCA 4662
||||| ||||| || ||||| ||| ||| || ||| || || ||||| || || ||
Sbjct 182 CCTCTAATTTTGCCAACTGTCTTACCTAGAGCGCTAGATACCGCTTTGTCTATATCGTCT 241
Query 4663 GCTGGGAAACGATCGCTAATGATTACATGCCCGCCACTTGCTTGTGGGCTAGCAGAATCT 4722
|| || | | ||||| | || ||||| ||||||||||||||||| ||||||| ||||
Sbjct 242 GCAGGATATCTGTCGCTTACAATGACATGTCCGCCACTTGCTTGTGGACTAGCAGCATCT 301
Query 4723 AAATGAAACTCTATGATTGCATCCGGTTTGACTTCGCTTTTAATCCAGTACATGCCATAA 4782
|| || || |||| || |||| ||||| || | |||||| ||| || | || |||
Sbjct 302 AAGTGGAATTCTACAATCACATCAGGTTTCACGTTCTTTTTAACCCAATATAAACCGTAA 361
Query 4783 TCTTTATAGTTTCCAACACGTTGACCGTACAATGTATCTTGATATAAATCTTGATTCATC 4842
||| |||||| || |||||||| || || | ||||||||||| || ||||| |||||
Sbjct 362 TCTGAATAGTTACCTACACGTTGTCCATATAGCGTATCTTGATACAAGTCTTGGTTCATT 421
Query 4843 GA 4844
||
Sbjct 422 GA 423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144128693251776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |