Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_021326.1 Length=45242 Score E Sequences producing significant alignments: (Bits) Value seq224806 251 2e-62 >seq224806 Length=425 Score = 251 bits (278), Expect = 2e-62 Identities = 309/422 (73%), Gaps = 0/422 (0%) Strand=Plus/Plus Query 4423 GGCGCATCAATTTGTCTGCCGTTAATGGCTTCAGCAATCCGCTTCGTGAAGCTGTCTAAA 4482 ||||||| ||||| || || || || || || ||||| ||||| || || || |||| Sbjct 2 GGCGCATTGATTTGCCTACCATTGATAGCCTCTGCAATACGCTTAGTAAAACTATCTAGG 61 Query 4483 TTGTTTTTAATGTAGTTTAAATCTTTCGTAGATGTGATAAAACCTAATTCGATTAAACGA 4542 | | | || |||| | ||| || || || ||||||||||| |||||||| | | Sbjct 62 TGTGTAGTGATATAGTCCATATCCTTTTTACTAGTTATAAAACCTAACTCGATTAATCTA 121 Query 4543 TAATTAAGATTAAGATCAGCAGACACGTTAGCGTTCAATAAATCCCCTCTAGGTGTCACA 4602 ||||| | ||| || | ||| |||||||| || |||||||| |||||||||||| Sbjct 122 TAATTTAAATTGAGTTGTCCAGTAACGTTAGCATTTAATAAATCGTTTCTAGGTGTCACG 181 Query 4603 CCTCTTATTTTACCCACTGTTTTATCTAATGCACTACTTAATGCCTTGTCAATGTCATCA 4662 ||||| ||||| || ||||| ||| ||| || ||| || || ||||| || || || Sbjct 182 CCTCTAATTTTGCCAACTGTCTTACCTAGAGCGCTAGATACCGCTTTGTCTATATCGTCT 241 Query 4663 GCTGGGAAACGATCGCTAATGATTACATGCCCGCCACTTGCTTGTGGGCTAGCAGAATCT 4722 || || | | ||||| | || ||||| ||||||||||||||||| ||||||| |||| Sbjct 242 GCAGGATATCTGTCGCTTACAATGACATGTCCGCCACTTGCTTGTGGACTAGCAGCATCT 301 Query 4723 AAATGAAACTCTATGATTGCATCCGGTTTGACTTCGCTTTTAATCCAGTACATGCCATAA 4782 || || || |||| || |||| ||||| || | |||||| ||| || | || ||| Sbjct 302 AAGTGGAATTCTACAATCACATCAGGTTTCACGTTCTTTTTAACCCAATATAAACCGTAA 361 Query 4783 TCTTTATAGTTTCCAACACGTTGACCGTACAATGTATCTTGATATAAATCTTGATTCATC 4842 ||| |||||| || |||||||| || || | ||||||||||| || ||||| ||||| Sbjct 362 TCTGAATAGTTACCTACACGTTGTCCATATAGCGTATCTTGATACAAGTCTTGGTTCATT 421 Query 4843 GA 4844 || Sbjct 422 GA 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144128693251776