Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq280556 125 6e-24 seq126021 125 6e-24 seq21568 116 3e-21 seq44495 113 4e-20 seq281289 109 5e-19 seq281664 105 6e-18 seq48980 91.5 1e-13 seq279770 86.0 6e-12 seq124980 82.4 7e-11 >seq280556 Length=777 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || |||| || ||||| || || | ||||| || | Sbjct 761 ATGCAAATTTTTGTGAAGACCTTAACAGGAAAAACAATCACTTTGGAAGTTGAGAGTTCA 702 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| |||| | || ||||||||| |||||||| || || || || || Sbjct 701 GATACTATTGATAACGTTAAAGCTAA-GATCCAAGATAAAGAAGGGATCCCACCAGACCA 643 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | || || || || ||||| || |||| ||| || | | | |||||||| Sbjct 642 ACAAAGGTTAATTTTCGCTGGGAAGCAATTGGAAGATGGCAGGACTTTAGCCGATTATAA 583 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||||||||||| ||||||||| |||| | || ||||| Sbjct 582 CATTCAAAAGGAATCGACACTTCACTTGGTGCTGCGTCTTCGTGGAGG 535 >seq126021 Length=250 Score = 125 bits (138), Expect = 6e-24 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | |||||||| || || || |||||||| || ||||| ||| | | Sbjct 17 ATGCAAATTTTCGTCAAAACGCTCACGGGGAAGACTATTACACTAGAAGTTGAAAGCTCT 76 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| ||||| |||||||| ||||| || || || ||||| Sbjct 77 GACACAATCGACAATGTCAAAGCTAAGATTCAAGACAAGGAAGGTATTCCCCCGGATCAG 136 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 ||| | ||||||||||| || || ||||| || ||| ||| | || | | ||||| | Sbjct 137 CAAAGGTTGATCTTTGCAGGCAAGCAGCTCGAAGATGGTCG-TACAC-TAGCCGATTACA 194 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||||||||||| || || || ||| | ||| Sbjct 195 ACATTCAAAAGGAGTCCACTCTTCACCTTGTG 226 >seq21568 Length=652 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || | || || || || || || | ||||||||| || Sbjct 537 ATGCAGATTTTCGTGAAGACATTGACTGGCAAGACCATCACTTTGGAAGTAGAAAGTTCC 478 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||| ||||||||||| ||||| || || || || Sbjct 477 GACACCATCGACAATGTGAAGACAAAGATTCAAGACAAAGAGGGAATCCCACCTGACCAG 418 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || || ||||| ||| |||| | ||||||| ||| Sbjct 417 CAGAGGCTGATCTTTGCAGGCAAGCAACTGGAAGATGGCAGAACTCTAGCAGATTACAAC 358 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || || |||||| | ||| |||| || || Sbjct 357 ATCCAAAAGGAATCAACTCTGCATTTGGTGCTTCGACTGCGTGGTGG 311 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 |||||| |||||||| || || || ||||| |||||||| | ||||||||||| || || Sbjct 232 AAAGATTCAAGACAAGGAGGGGATTCCTCCAGATCAACAGAGATTGATCTTTGCTGGAAA 173 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||| |||||||| | | || | ||||| || ||||| || || || || || || Sbjct 172 ACAATTGGAGGATGGTCGGACTTTGGCTGATTACAATATTCAGAAAGAGTCCACCCTCCA 113 Query 24907 CTTGGTGTTGCGATTGCGCGGAGGC 24931 | | || | || ||||||| ||| Sbjct 112 CCTTGTCCTCCGCCTGCGCGGTGGC 88 >seq44495 Length=1402 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || |||||||| || || ||||| || ||| || | Sbjct 1374 ATGCAAATTTTCGTAAAGACCCTGACAGGTAAAACCATCACCCTCGAGGTTGAATCCTCT 1315 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| ||| |||| |||||| ||||| || || || || || || || Sbjct 1314 GATACCATCGATAACGTTAAGGCAAA-GATCCAGGACAAGGAGGGTATTCCCCCAGACCA 1256 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | ||||| |||||||| || || |||||| | | | | | |||||||| Sbjct 1255 GCAAAGACTTATCTTCGCCGGGAAGCAACTAGAGGATGGTCGTACCCTTGCCGATTATAA 1196 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||| | |||||||| Sbjct 1195 CATCCAGAAGGAGTCGACTCTTCACCTTGTGTTGCG 1160 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || | ||||| || || || || || || || || | | Sbjct 919 GATGCAGATCTTCGTGAAGACCTTGACCGGAAAGACCATCACCCTGGAGGTGGAGAGCTC 860 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || || || ||||| ||||| || ||||| ||||| Sbjct 859 TGACACGATCGATAATGTGAAAGCTAAAATTCAGGACAAGGAAGGCATCCCTCCGGATCA 800 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||| || ||||| ||||| |||||| || | | | ||||| || Sbjct 799 GCAGAGGCTGATCTTCGCTGGGAAGCAGCTTGAGGATGGAAGGACTCTCGCTGATTACAA 740 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||| ||||| || || || ||| | || |||| Sbjct 739 CATTCAGAAGGAGTCCACTCTTCACCTCGTCCTGCG 704 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || ||| | ||||| || || || || | || || || | Sbjct 1146 ATGCAGATTTTCGTCAAGACGTTGACCGGCAAGACCATCACCTTAGAGGTTGAGAGTTCG 1087 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || ||||| || || || || Sbjct 1086 GACACCATTGACAACGTCAAGGCTAAGATCCAAGACAAGGAGGGAATCCCACCAGACCAG 1027 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||| || || || |||||||| ||| || | || | || |||||| Sbjct 1026 CAGAGGCTGATCTTCGCTGGAAAGCAGCTGGAAGATGGTAGGACTTTGGCTGACTATAAC 967 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| || || || ||||||||| Sbjct 966 ATCCAGAAGGAGTCAACCCTGCACTTGGTG 937 >seq281289 Length=787 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| |||||| | ||||| || ||||| ||||| || || || || || ||| | Sbjct 325 GATGCAAATCTTTGTGAAAACTCTCACCGGCAAAACAATAACCCTTGAGGTGGAAAGTTC 384 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || | || || || || || || ||||| ||||| ||||| || || Sbjct 385 TGATACTATTGACAATGTGAAGGCCAAAATTCAGGATAAAGAGGGAATCCCTCCAGACCA 444 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | || ||||| || || ||||| |||||| ||| | | | |||||||| Sbjct 445 GCAAAGGCTTATTTTTGCTGGAAAGCAGCTCGAGGATGGTCGAACCCTCGCCGATTATAA 504 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||| ||||| || || ||||||||| | || || || || || Sbjct 505 CATACAAAAAGAATCAACCCTTCACTTGGTGCTCCGTTTACGTGGTGG 552 >seq281664 Length=792 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || | || || || | Sbjct 320 ATGCAGATCTTTGTCAAGACCCTGACAGGGAAGACCATCACCTTGGAGGTGGAGAGTTCT 261 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || || | ||| ||||| ||||| ||||| |||||||| ||||| || || Sbjct 260 GATACAATCGACAATGTTAAGGCAAAA-ATCCAGGACAAGGAAGGAATTCCTCCAGACCA 202 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||||||| || || |||||||| ||| || | | | | ||||| || Sbjct 201 GCAGCGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGAAGGACCCTTGCTGATTACAA 142 Query 24883 CATTCAAAAGGAATCGACACTACAC 24907 |||||| ||||| || || || ||| Sbjct 141 CATTCAGAAGGAGTCTACCCTTCAC 117 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || | || || || || || || ||||| || || | | Sbjct 548 ATGCAGATCTTCGTTAAGACTTTGACTGGAAAGACCATCACCCTCGAGGTCGAGAGCTCT 489 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || ||||| || || ||||| ||||| || || || || || Sbjct 488 GATACCATCGACAACGTGAAGGCAAAA-ATTCAGGACAAGGAAGGCATCCCCCCAGACCA 430 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||||||||| || |||||||||||| || | | | || || || Sbjct 429 GCAAAGATTGATCTTTGCCGGAAAGCAGCTGGAGGATGGAAGGACTCTTGCTGACTACAA 370 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| ||||| || || || ||| | || | || || | ||||| Sbjct 369 CATTCAGAAGGAGTCAACCCTTCACCTTGTCCTTCGTCTGAGGGGAGG 322 >seq48980 Length=3483 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/210 (71%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | |||||||| ||||| || || || || ||||| || || | Sbjct 824 ATGCAGATCTTCGTGAAAACGCTTACCGGGAAGACCATAACTCTCGAGGTCGAGAGTTCT 883 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||| || || || || |||||||| || || || Sbjct 884 GATACCATCGATAATGTCAAGGCAAAGATTCAGGATAAGGAGGGAATACCGCCGGACCAG 943 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || ||| | || || ||||| || ||| |||||||| |||| | || || | || || | Sbjct 944 CAGCGTCTCATTTTCGCCGGTAAGCAGATGGAGGATGGTCGA-ACACTTG-CCGACTACA 1001 Query 24882 ACATTCAAAAGGAATCGACACTACA-CTTG 24910 |||| || ||||| || || || || |||| Sbjct 1002 ACATCCAGAAGGAGTCCACGCTCCATCTTG 1031 >seq279770 Length=767 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| | || || || || || ||||| ||||| || || || ||| | Sbjct 409 GATGCAAATATTTGTGAAGACCCTTACTGGCAAAACCATTACTCTTGAGGTGGAAAGTTC 468 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || | || || || ||||||||||| || || || || || ||||| Sbjct 469 TGATACAATTGACAATGTCAAGGCTAAAATCCAAGACAAGGAGGGTATCCCACCTGATCA 528 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| ||||| || || ||||| ||||| ||| | | || || || Sbjct 529 ACAGAGACTGATTTTTGCTGGTAAGCAGCTTGAGGACGGTCGAACTCTCGCCGACTACAA 588 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||||| |||||||| || || || ||||| Sbjct 589 TATTCAGAAGGAATCTACCCTGCATTTGGT 618 >seq124980 Length=249 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| || || |||||||| || || ||||| ||||| |||||||||||||| || Sbjct 17 AAGATCCAGGATAAGGAAGGAATTCCCCCGGATCAGCAACGATTGATCTTTGCCGGCAAG 76 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || || |||||| ||| | | || || ||||| || || ||||| || || ||| Sbjct 77 CAACTTGAGGATGGCCGAACTCTTGCCGACTACAACATCCAGAAAGAATCAACTCTTCAC 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448181735543360