Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_022758.1 Length=44459 Score E Sequences producing significant alignments: (Bits) Value seq224806 86.0 2e-12 >seq224806 Length=425 Score = 86.0 bits (94), Expect = 2e-12 Identities = 228/343 (66%), Gaps = 13/343 (4%) Strand=Plus/Minus Query 22636 CAAGACATGTATCAAGATACTGCATACGGTGTTAATGTAGGCAATAAAAAAGATTATGGC 22695 |||||| ||||||||||||| ||| || |||||| || | |||||| || Sbjct 414 CAAGACTTGTATCAAGATACGCTATATGGACAACGTGTAGGTAACTATTCAGATTACGGT 355 Query 22696 TTATATTGGGTTAAATCACAGGGGTA---TGACATTGTTCTAGAGATTCATTTAGACGCA 22752 ||||||||||||||| | | | | ||| | || |||| | || ||||| || Sbjct 354 TTATATTGGGTTAAAAAGAACGTGAAACCTGATGTGATTGTAGAATTCCACTTAGATGCT 295 Query 22753 GCGGGAGAAAGTGCAAGTGGTGGACATGTTATTATCTCAAGTCA---ATTTAATGCAGAT 22809 || | | |||||||| |||||||| ||| | ||| | || | |||||| Sbjct 294 GCTAGTCCACAAGCAAGTGGCGGACATGTCATTGT---AAGCGACAGATATCCTGCAGAC 238 Query 22810 ACTATTGATAAAA--GTATACAAGATGTTATTAAAAATAACTTAGGACAAATAAGAGGTG 22867 ||| || ||| |||| | || | | | || | | || |||| ||||| | Sbjct 237 GATATAGACAAAGCGGTAT-CTAGC-GCTCTAGGTAAGACAGTTGGCAAAATTAGAGGCG 180 Query 22868 TAACACCTCGTAATGATTTACTAAACGTTAATGTATCAGCAGAAATAAATATGAATTATC 22927 | |||||| | || |||||| |||| | ||| || | | | || | ||| | |||||| Sbjct 179 TGACACCTAGAAACGATTTATTAAATGCTAACGTTACTGGACAACTCAATTTAAATTATA 120 Query 22928 GTTTATCTGAATTAGGTTTTATTACTAATAAAAAAGATATGGA 22970 | ||| || ||||||||||| |||| |||||| |||||||| Sbjct 119 GATTAATCGAGTTAGGTTTTATAACTAGTAAAAAGGATATGGA 77 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141632171554224