Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_022918.1 Length=132123 Score E Sequences producing significant alignments: (Bits) Value seq235819 111 1e-19 >seq235819 Length=465 Score = 111 bits (122), Expect = 1e-19 Identities = 115/148 (78%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 30412 TGCATTAGCCTTATCATTAATTGATTTATCTTTATGAGGGCTATAAGGAGTGACTCCTAC 30471 |||||||| |||||||||||| ||||| |||| |||||| |||||||| | ||||| | Sbjct 463 TGCATTAGTCTTATCATTAATAGATTTGTCTTGATGAGGACTATAAGGTTTTACTCCCTC 404 Query 30472 AATACCTTCTACTTGC-TTATGCTGTTTGTCTCTATATTCTACCATTGCATCATTTAAAA 30530 ||| | ||| || | ||||| ||||| || | ||| || ||||| || |||||||||| Sbjct 403 AATTTCG-CTAATTTCATTATGTTGTTTTTCACGATAATCAACCATCGCTTCATTTAAAA 345 Query 30531 TATGTCCACCCATATAAATTACTTTGTC 30558 |||| || | | ||||| ||||| || Sbjct 344 TATGACCTGCTAGGTAAATAACTTTTTC 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421097083877088