Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_022920.1 Length=139738 Score E Sequences producing significant alignments: (Bits) Value seq235819 98.7 9e-16 >seq235819 Length=465 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 25544 TCTGCATTAGCCTTATCATTGATTGACTTATCTTTGTGAGGGCTATACGGAGTTACTCCT 25603 |||||||||| ||||||||| || || || |||| ||||| ||||| || ||||||| Sbjct 465 TCTGCATTAGTCTTATCATTAATAGATTTGTCTTGATGAGGACTATAAGGTTTTACTCCC 406 Query 25604 ACAATGCCATCTACTTCTTTATGTTGTTTATCTCTGTAGTCTACCATAGCTTCATTTAGG 25663 |||| | | ||| ||||||||||| || | || || ||||| |||||||||| Sbjct 405 TCAATTTCGCTAATTTCATTATGTTGTTTTTCACGATAATCAACCATCGCTTCATTTAAA 346 Query 25664 ATATGTCCACCCATATAAATTACTTTGTC 25692 ||||| || | | ||||| ||||| || Sbjct 345 ATATGACCTGCTAGGTAAATAACTTTTTC 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445328658552960