Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq280556 129 9e-25
seq279770 109 9e-19
seq281289 102 1e-16
>seq280556
Length=777
Score = 129 bits (142), Expect = 9e-25
Identities = 146/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || ||||||||||||||||| ||| | || || || | |
Sbjct 760 TGCAAATTTTTGTGAAGACCTTAACAGGAAAAACAATCACTTTGGAAGTTGAGAGTTCAG 701
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | || || ||| ||| || ||| ||||||||| || ||||| || ||||
Sbjct 700 ATACTATTGATAACGTTAAAGCTAAGATCCAAGATAAAGAAGGGATCCCACCAGACCAAC 641
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|||| | ||||| || || || ||||| || ||| || || ||| | |||||||| |
Sbjct 640 AAAGGTTAATTTTCGCTGGGAAGCAATTGGAAGATGGCAGGACTTTAGCCGATTATAACA 581
Query 146212 TACAAAAAGAATCGAC 146227
| ||||| ||||||||
Sbjct 580 TTCAAAAGGAATCGAC 565
>seq279770
Length=767
Score = 109 bits (120), Expect = 9e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||| | || || |||||||| || | || || ||| |
Sbjct 183 TGCAAATCTTCGTAAAAACCCTCACTGGCAAAACAATCACCCTCGAGGTGGAAAGCTCAG 242
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| | |||||||| || || ||| |||||| |||||||||||||| ||||
Sbjct 243 ACACAATTGACAATGTAAAGGCAAAGATTCAAGATAAAGAGGGCATTCCACCCGACCAAC 302
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || || ||||| ||||| ||| | || || ||||| | | ||||| ||||
Sbjct 303 AGAGGCTTATCTTTGCTGGTAAGCAACTTGAGGACGGCCGAACGCTTGCCGATTACAATA 362
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| || || ||||| || ||||||| ||
Sbjct 363 TCCAGAAGGAATCTACACTCCATTTGGT 390
>seq281289
Length=787
Score = 102 bits (112), Expect = 1e-16
Identities = 140/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| | || || |||||||| || |||| || ||| | |
Sbjct 327 TGCAAATCTTTGTGAAAACTCTCACCGGCAAAACAATAACCCTTGAGGTGGAAAGTTCTG 386
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | ||||| || ||||| || |||||| || || || || || || |
Sbjct 387 ATACTATTGACAATGTGAAGGCCAAAATTCAGGATAAAGAGGGAATCCCTCCAGACCAGC 446
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|||| || |||||||| || || || | || ||| | |||| | | |||||||| |
Sbjct 447 AAAGGCTTATTTTTGCTGGAAAGCAGCTCGAGGATGGTCGAACCCTCGCCGATTATAACA 506
Query 146212 TACAAAAAGAATCGAC 146227
||||||||||||| ||
Sbjct 507 TACAAAAAGAATCAAC 522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783168039967040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |