Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_023500.1
Length=43301
Score E
Sequences producing significant alignments: (Bits) Value
seq224806 251 2e-62
>seq224806
Length=425
Score = 251 bits (278), Expect = 2e-62
Identities = 309/422 (73%), Gaps = 0/422 (0%)
Strand=Plus/Minus
Query 39837 TCGATGAATCAAGATTTATATCAAGATACATTGTACGGTCAACGTGTTGGAAACTATAAA 39896
|| ||||| ||||| || ||||||||||| | || || |||||||| || |||||| |
Sbjct 423 TCAATGAACCAAGACTTGTATCAAGATACGCTATATGGACAACGTGTAGGTAACTATTCA 364
Query 39897 GATTATGGCATGTACTGGATTAAAAGCGAAGTCAAACCGGATGCAATCATAGAGTTTCAT 39956
||||| || | || ||| |||||| | || ||||| |||| || |||| || ||
Sbjct 363 GATTACGGTTTATATTGGGTTAAAAAGAACGTGAAACCTGATGTGATTGTAGAATTCCAC 304
Query 39957 TTAGATTCTGCTAGCCCACAAGCAAGTGGCGGGCATGTAATCATTAGCGATCGTTTCCCA 40016
|||||| ||||||| ||||||||||||||||| ||||| || | ||||| | | ||
Sbjct 303 TTAGATGCTGCTAGTCCACAAGCAAGTGGCGGACATGTCATTGTAAGCGACAGATATCCT 244
Query 40017 GCTGATGACATTGACAAGGCATTAAGTAGTGCATTAGATAAAACAGTGGGTAAAATAAGA 40076
|| || || || ||||| || || ||| || ||| ||| ||||| || ||||| |||
Sbjct 243 GCAGACGATATAGACAAAGCGGTATCTAGCGCTCTAGGTAAGACAGTTGGCAAAATTAGA 184
Query 40077 GGTGTGACACCTAGAGGGGATTTATTGAACGCTAACGTGTCTGCTGATCTTAATCTTAAT 40136
|| |||||||||||| |||||||| || |||||||| ||| | || ||| | |||
Sbjct 183 GGCGTGACACCTAGAAACGATTTATTAAATGCTAACGTTACTGGACAACTCAATTTAAAT 124
Query 40137 TATCGTTTAATCGAATTAGGTTTTATCACATCTACGAAAGATTTAAACTACATTAAAAAC 40196
||| | |||||||| ||||||||||| || || || ||| | |||| || | |
Sbjct 123 TATAGATTAATCGAGTTAGGTTTTATAACTAGTAAAAAGGATATGGACTATATCACTACA 64
Query 40197 AATTTAGACAGCTTCACGAAGCGGATTGCTGAAGCCATTAACGGCAGACAAATTGATGCG 40256
| |||| || || || ||||| ||||| || || || || || || ||||| |||||
Sbjct 63 CACCTAGATAGTTTTACTAAGCGTATTGCAGAGGCTATCAATGGTAGGCAAATCAATGCG 4
Query 40257 CC 40258
||
Sbjct 3 CC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137939997702672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |