Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_023582.1 Length=92417 Score E Sequences producing significant alignments: (Bits) Value seq254897 307 6e-79 >seq254897 Length=556 Score = 307 bits (340), Expect = 6e-79 Identities = 260/320 (81%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 71526 ACTAATTCGCCATCTTTCCAAATAAGCGTCATTGTCATATCATCATTTAAGATGTAAATA 71585 ||||||| || ||||||||||| | ||||| |||||||||||||| | ||||| | | Sbjct 237 ACTAATTTTCCGTCTTTCCAAATTAAAGTCATCGTCATATCATCATTAAGCATGTAGAAA 296 Query 71586 GAAACGCTATGTTCATTTTTAACTTCCGAAATAGTGCGGTTACCGTACATATAAGATTTT 71645 | || |||||| ||||| || ||||||||||| | ||||| | | || ||||| |||| Sbjct 297 GCAATACTATGTCTATTTTCAATTTCCGAAATAGAGTGGTTAACATGCAAATAAGGTTTT 356 Query 71646 AATATTTTTAAGTCTTTCCAACCTTCCTCTTTTGAAGGTATTGCATTTCTAACTTCTAAA 71705 ||| ||| || | | ||| || | |||| |||||||| |||||||||||||||| Sbjct 357 AATGATTTAAAATAATGCCACCCGATATTTTTTAAAGGTATTAAATTTCTAACTTCTAAA 416 Query 71706 AGTCTAGGAATTGCCGTTTCTTCTGTGATTGATTCTTCAATTTCTACTGTGAAAGTCTCG 71765 |||||||||||||||||||||| || ||| |||||| | ||||||||||||||| || Sbjct 417 AGTCTAGGAATTGCCGTTTCTTTCGTAATTTCTTCTTCGACTTCTACTGTGAAAGTTTCA 476 Query 71766 TTTACAGCAATTTCATGCTCTATTGATATATTTTGAAGCATATCGAAATACACAGAACCA 71825 |||| |||||||||||||||||| || | |||||||| |||||||||||||||||||| Sbjct 477 TTTATAGCAATTTCATGCTCTATCGACAAATTTTGAATTTTATCGAAATACACAGAACCA 536 Query 71826 CCATCGAGATTACTATAAAA 71845 ||||| ||||| |||||||| Sbjct 537 CCATCAAGATTGCTATAAAA 556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 294510360182896