Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq227708 86.0 7e-12 >seq227708 Length=434 Score = 86.0 bits (94), Expect = 7e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 158223 ACATTCTAGACGCAGCAGAAGAAGCAGGAGTTGATATTAACTACTCTTGTCGTGCTGGTG 158282 |||||||||| ||||| |||||||||||||| || | || ||||| | || || | Sbjct 1 ACATTCTAGATGCAGCTGAAGAAGCAGGAGTAGACCTACCATATTCTTGCAGGGCAGGCG 60 Query 158283 CTTGCTCTTCATGTGCAGGTAAAATTGTATCTGGAACTGTTGATCAGAGTGATCAGTCGT 158342 | || ||| | || || || ||||| || | || | || |||||| ||| ||||| Sbjct 61 CGTGTTCTACGTGCGCCGGGAAAATGGTTTTGGGTTCAGTCGATCAGTCGGATGGGTCGT 120 Query 158343 TCCTAGACGATGATCAAATCGCAGCAGGATTTGTTCTT-ACGTGTGTAGCATATCCAACA 158401 |||| || ||| |||||| |||| ||| || || || || ||||| || ||||| Sbjct 121 TCCTTGATGATAGTCAAATGGCAG-AGGGTTATTTGTTAACTTGTGTTTCAATCCCAACT 179 Query 158402 TCTGATTGTGT 158412 | || ||||| Sbjct 180 GCAGACTGTGT 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543193981016960