Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq303880 82.4 1e-10 >seq303880 Length=1948 Score = 82.4 bits (90), Expect = 1e-10 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 53079 CTTACAATGCAGATTTTGATGGAGATGAAATGAATTTACATATTCCTCAGTCTTATGAAG 53138 |||||||||| ||||||||||| |||||||||||| | ||| |||||||||| | ||| Sbjct 171 CTTACAATGCTGATTTTGATGGTGATGAAATGAATATGCATGTTCCTCAGTCATTTGAGA 112 Query 53139 CTACTGCAGAATTAATGGAA 53158 | | |||||| || ||||| Sbjct 111 CAAGGGCAGAAGTATTGGAA 92 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652780827608000