Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_024355.1 Length=93794 Score E Sequences producing significant alignments: (Bits) Value seq254897 302 3e-77 >seq254897 Length=556 Score = 302 bits (334), Expect = 3e-77 Identities = 259/320 (81%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 78317 ACTAATTCGCCATCTTTCCAAATAAGCGTCATTGTCATATCATCATTTAAGATGTAAATA 78376 ||||||| || ||||||||||| | ||||| |||||||||||||| | ||||| | | Sbjct 237 ACTAATTTTCCGTCTTTCCAAATTAAAGTCATCGTCATATCATCATTAAGCATGTAGAAA 296 Query 78377 GAAACGCTATGTTCATTTTTAACTTCCGAAATAGTGCGGTTACCGTACATATAAGATTTT 78436 | || |||||| ||||| || ||||||||||| | ||||| | | || ||||| |||| Sbjct 297 GCAATACTATGTCTATTTTCAATTTCCGAAATAGAGTGGTTAACATGCAAATAAGGTTTT 356 Query 78437 AATATTTTTAAGTCTTTCCAACCTTCCTCTTTTGAAGGTATTGCATTTCTAACTTCTAAA 78496 ||| ||| || | | ||| || | |||| |||||||| |||||||||||||||| Sbjct 357 AATGATTTAAAATAATGCCACCCGATATTTTTTAAAGGTATTAAATTTCTAACTTCTAAA 416 Query 78497 AGTCTAGGAATTGCCGTTTCTTCTGTGATTGATTCTTCAATTTCTACTGTGAAAGTCTCG 78556 |||||||||||||||||||||| || ||| |||||| | ||||||||||||||| || Sbjct 417 AGTCTAGGAATTGCCGTTTCTTTCGTAATTTCTTCTTCGACTTCTACTGTGAAAGTTTCA 476 Query 78557 TTCACAGCAATTTCATGCTCTATTGATATATTTTGAAGCATATCGAAATACACAGAACCA 78616 || | |||||||||||||||||| || | |||||||| |||||||||||||||||||| Sbjct 477 TTTATAGCAATTTCATGCTCTATCGACAAATTTTGAATTTTATCGAAATACACAGAACCA 536 Query 78617 CCATCGAGATTACTATAAAA 78636 ||||| ||||| |||||||| Sbjct 537 CCATCAAGATTGCTATAAAA 556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298900374753160