Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_024355.1
Length=93794
Score E
Sequences producing significant alignments: (Bits) Value
seq254897 302 3e-77
>seq254897
Length=556
Score = 302 bits (334), Expect = 3e-77
Identities = 259/320 (81%), Gaps = 0/320 (0%)
Strand=Plus/Plus
Query 78317 ACTAATTCGCCATCTTTCCAAATAAGCGTCATTGTCATATCATCATTTAAGATGTAAATA 78376
||||||| || ||||||||||| | ||||| |||||||||||||| | ||||| | |
Sbjct 237 ACTAATTTTCCGTCTTTCCAAATTAAAGTCATCGTCATATCATCATTAAGCATGTAGAAA 296
Query 78377 GAAACGCTATGTTCATTTTTAACTTCCGAAATAGTGCGGTTACCGTACATATAAGATTTT 78436
| || |||||| ||||| || ||||||||||| | ||||| | | || ||||| ||||
Sbjct 297 GCAATACTATGTCTATTTTCAATTTCCGAAATAGAGTGGTTAACATGCAAATAAGGTTTT 356
Query 78437 AATATTTTTAAGTCTTTCCAACCTTCCTCTTTTGAAGGTATTGCATTTCTAACTTCTAAA 78496
||| ||| || | | ||| || | |||| |||||||| ||||||||||||||||
Sbjct 357 AATGATTTAAAATAATGCCACCCGATATTTTTTAAAGGTATTAAATTTCTAACTTCTAAA 416
Query 78497 AGTCTAGGAATTGCCGTTTCTTCTGTGATTGATTCTTCAATTTCTACTGTGAAAGTCTCG 78556
|||||||||||||||||||||| || ||| |||||| | ||||||||||||||| ||
Sbjct 417 AGTCTAGGAATTGCCGTTTCTTTCGTAATTTCTTCTTCGACTTCTACTGTGAAAGTTTCA 476
Query 78557 TTCACAGCAATTTCATGCTCTATTGATATATTTTGAAGCATATCGAAATACACAGAACCA 78616
|| | |||||||||||||||||| || | |||||||| ||||||||||||||||||||
Sbjct 477 TTTATAGCAATTTCATGCTCTATCGACAAATTTTGAATTTTATCGAAATACACAGAACCA 536
Query 78617 CCATCGAGATTACTATAAAA 78636
||||| ||||| ||||||||
Sbjct 537 CCATCAAGATTGCTATAAAA 556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 298900374753160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |