Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq21568 168 1e-36
seq280556 163 6e-35
seq281289 154 3e-32
seq281664 152 1e-31
seq44495 152 1e-31
seq279770 138 2e-27
seq126021 125 1e-23
seq122851 114 3e-20
seq48980 105 1e-17
seq124980 102 2e-16
>seq21568
Length=652
Score = 168 bits (186), Expect = 1e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || || |||||||| ||||| || || || || ||||| | |||| |||| ||
Sbjct 323 CGAAGCACCAAATGCAGAGTTGATTCCTTTTGGATGTTGTAATCTGCTAGAGTTCTGCCA 382
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| ||||| || || |||||||| || || || || || || || ||||| || ||
Sbjct 383 TCTTCCAGTTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATTCCCTCTTTG 442
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||||||||||| || ||||| || || || || | ||||||||||||||| ||
Sbjct 443 TCTTGAATCTTTGTCTTCACATTGTCGATGGTGTCGGAACTTTCTACTTCCAAAGTGATG 502
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| ||||| ||||| || || |||||||||
Sbjct 503 GTCTTGCCAGTCAATGTCTTCACGAAAATCTGCATT 538
Score = 127 bits (140), Expect = 4e-24
Identities = 114/143 (80%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || |||||||| ||||| ||||||| | | | | |||
Sbjct 101 CGGAGGACAAGGTGGAGGGTGGACTCTTTCTGAATATTGTAATCAGCCAAAGTCCGACCA 160
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | |||||||||||||||||| | ||| |||||||||||||| || || |||||
Sbjct 161 TCCTCCAATTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATCCCCTCCTTG 220
Query 82716 TCTTGAATCTTTGCTTTTACATT 82738
|||||||||||||| || |||||
Sbjct 221 TCTTGAATCTTTGCCTTCACATT 243
>seq280556
Length=777
Score = 163 bits (180), Expect = 6e-35
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | |||||| || ||||| || || ||||| || || || |||||||| | |
Sbjct 535 CCTCCACGAAGACGCAGCACCAAGTGAAGTGTCGATTCCTTTTGAATGTTATAATCGGCT 594
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | || || ||||| | ||| || ||||| || |||| |||||||| ||||| ||
Sbjct 595 AAAGTCCTGCCATCTTCCAATTGCTTCCCAGCGAAAATTAACCTTTGTTGGTCTGGTGGG 654
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| ||||| |||||||| ||||| ||||| || || ||||| ||||| | || |||
Sbjct 655 ATCCCTTCTTTATCTTGGATCTTAGCTTTAACGTTATCAATAGTATCTGAACTCTCAACT 714
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| || || || ||||| || ||||| ||||| || ||||||
Sbjct 715 TCCAAAGTGATTGTTTTTCCTGTTAAGGTCTTCACAAAAATTTGCATT 762
>seq281289
Length=787
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 82593 AAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTA 82652
||||| || || ||||| || || |||||||| ||||| |||||||| | || ||| |
Sbjct 543 AAACGGAGCACCAAGTGAAGGGTTGATTCTTTTTGTATGTTATAATCGGCGAGGGTTCGA 484
Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712
|| || || || || ||||||||||| || || ||||| || |||||||| ||||| ||
Sbjct 483 CCATCCTCGAGCTGCTTTCCAGCAAAAATAAGCCTTTGCTGGTCTGGAGGGATTCCCTCT 424
Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772
||||| ||||| || || || ||||| ||||| |||||| | ||| || || | |||
Sbjct 423 TTATCCTGAATTTTGGCCTTCACATTGTCAATAGTATCAGAACTTTCCACCTCAAGGGTT 364
Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||||| || | || || ||||| || |||||
Sbjct 363 ATTGTTTTGCCGGTGAGAGTTTTCACAAAGATTTGCAT 326
>seq281664
Length=792
Score = 152 bits (168), Expect = 1e-31
Identities = 164/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| || ||||| || ||||| || || ||||||| || | || ||
Sbjct 105 ACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCC 164
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || || |||||||||||||| | | || || |||||||| |||||||||||
Sbjct 165 ATCTTCCAGCTGCTTTCCAGCAAAGATCAACCGCTGCTGGTCTGGAGGAATTCCTTCCTT 224
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| || || ||||| || ||||| || || |||||| | || || ||||| || ||
Sbjct 225 GTCCTGGATTTTTGCCTTAACATTGTCGATTGTATCAGAACTCTCCACCTCCAAGGTGAT 284
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| ||||||| ||||| ||||| |||||||||
Sbjct 285 GGTCTTCCCTGTCAGGGTCTTGACAAAGATCTGCATT 321
Score = 134 bits (148), Expect = 3e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||||| || | || |||||||| || ||||| || || || || |
Sbjct 548 TACCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCTG 607
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| ||| ||||| || | ||||||||||| ||||| ||||| ||||| ||||| |
Sbjct 608 CAAGAGTTCGGCCGTCCTCCAACTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGGG 667
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| || |||||||| || || || || ||||| || || || || |
Sbjct 668 GGATACCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATTGTGTCTGAAGACTCAA 727
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||| || || | || || ||||| || |||||
Sbjct 728 CCTCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTGACAAAAATTTGCAT 776
>seq44495
Length=1402
Score = 152 bits (168), Expect = 1e-31
Identities = 170/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || || | ||| || || |||||||| || || || ||||| || ||||| ||||
Sbjct 920 CCACCCCTGAGACGAAGCACCAAGTGCAGGGTTGACTCCTTCTGGATGTTATAGTCAGCC 979
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | ||||| ||||| || || |||||||| ||||| || || || || ||||| ||
Sbjct 980 AAAGTCCTACCATCTTCCAGCTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGG 1039
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
||||| ||||| ||||| ||||| || || || || ||||| || || | || ||
Sbjct 1040 ATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCAATGGTGTCCGAACTCTCAACC 1099
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || || || |||||||| ||||||||||| || || ||||||||
Sbjct 1100 TCTAAGGTGATGGTCTTGCCGGTCAACGTCTTGACGAAAATCTGCAT 1146
>seq279770
Length=767
Score = 138 bits (152), Expect = 2e-27
Identities = 160/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658
|| || || || || |||||||| ||||| ||||| ||||| | || ||| |||||
Sbjct 393 AGCACCAAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGGCCGTCC 334
Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718
|| ||||| || ||||||||||| || || ||||| || || || || || || ||||||
Sbjct 333 TCAAGTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCT 274
Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG-GTTCTACTTCCAAAGTTATCGT 82777
||||||||||| |||||||| ||||| || || | || ||| || || | || || ||
Sbjct 273 TGAATCTTTGCCTTTACATTGTCAATTGTGTC-TGAGCTTTCCACCTCGAGGGTGATTGT 215
Query 82778 CTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || | || ||||| || || |||||
Sbjct 214 TTTGCCAGTGAGGGTTTTTACGAAGATTTGCAT 182
Score = 113 bits (124), Expect = 9e-20
Identities = 102/126 (81%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 82686 CTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATC 82745
|| ||||| || || || || || ||||||||||||||||| ||||| ||||| |||||
Sbjct 762 CTCTGTTGGTCAGGTGGAATGCCCTCCTTATCTTGAATCTTAGCTTTCACATTATCAATT 703
Query 82746 GTATCATTAGGT-TCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATAT 82804
|||||| || | || ||||||||||| || || ||||| ||||| || || ||||| ||
Sbjct 702 GTATCAG-AGCTCTCCACTTCCAAAGTAATTGTTTTGCCAGTCAAGGTTTTCACAAAAAT 644
Query 82805 CTGCAT 82810
||||||
Sbjct 643 CTGCAT 638
>seq126021
Length=250
Score = 125 bits (138), Expect = 1e-23
Identities = 158/217 (73%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| ||||| || || || || || || ||||| | ||| | | |||
Sbjct 232 ACGGAGCACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGCTAGTGTACGACC 173
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || || || || |||||||| | ||||| ||||| || || || ||||||||
Sbjct 172 ATCTTCGAGCTGCTTGCCTGCAAAGATCAACCTTTGCTGATCCGGGGGAATACCTTCCTT 113
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||||| ||||| ||||| || || || ||| ||| ||||| | || ||
Sbjct 112 GTCTTGAATCTTAGCTTTGACATTGTCGATTGTGTCAGAGCTTTCAACTTCTAGTGTAAT 53
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||||| || || | ||| || || || || ||||||
Sbjct 52 AGTCTTCCCCGTGAGCGTTTTGACGAAAATTTGCATT 16
>seq122851
Length=247
Score = 114 bits (126), Expect = 3e-20
Identities = 101/126 (80%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 82686 CTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATC 82745
|| ||||| || || || || || ||||||||||||||||| ||||| ||||| |||||
Sbjct 244 CTCTGTTGGTCAGGTGGGATACCCTCCTTATCTTGAATCTTGGCTTTCACATTGTCAATG 185
Query 82746 GTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATC 82805
|| || | ||| |||||||| || |||||||| ||||| || ||||| ||||| |||
Sbjct 184 GTGTCTGAACTTTCGACTTCCAATGTGATCGTCTTCCCTGTTAAGGTCTTCACAAAAATC 125
Query 82806 TGCATT 82811
||||||
Sbjct 124 TGCATT 119
>seq48980
Length=3483
Score = 105 bits (116), Expect = 1e-17
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|| || || || || ||||| || || || || | || ||| ||| || || | ||
Sbjct 1026 TGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGTGTTCGACCATCCTCCATCTGC 967
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| || || || || || | || || || || |||||||| |||||||| |||||||||
Sbjct 966 TTACCGGCGAAAATGAGACGCTGCTGGTCCGGCGGTATTCCCTCCTTATCCTGAATCTTT 907
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
|| || ||||| || || |||||| | || || || | |||||| ||||| || ||
Sbjct 906 GCCTTGACATTATCGATGGTATCAGAACTCTCGACCTCGAGAGTTATGGTCTTCCCGGTA 847
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
| ||| || || || ||||||||
Sbjct 846 AGCGTTTTCACGAAGATCTGCAT 824
>seq124980
Length=249
Score = 102 bits (112), Expect = 2e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| ||||| ||||||||||| || || || || | ||| ||| ||
Sbjct 147 CGTAGGACGAGGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCA 88
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || ||||| || || |||||||| | || ||| ||||| || || ||||||||||||
Sbjct 87 TCCTCAAGTTGCTTGCCGGCAAAGATCAATCGTTGCTGATCCGGGGGAATTCCTTCCTTA 28
Query 82716 TCTTGAATCTTTGCTTTTACATTTTC 82741
|| || ||||| || || || || ||
Sbjct 27 TCCTGGATCTTGGCCTTGACGTTGTC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 977988994472968
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