Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq44495 116 4e-21
seq279770 113 4e-20
seq81485 104 2e-17
seq48980 102 8e-17
seq281664 98.7 1e-15
seq281289 95.1 1e-14
>seq44495
Length=1402
Score = 116 bits (128), Expect = 4e-21
Identities = 146/198 (74%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || |||||||| | | || ||||| |||||||| ||
Sbjct 722 GTGGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCTTCCATCCTCAAGCTGCTTCCCA 781
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TT 133582
||| | || |||| |||||| || |||||||||||||||||||| ||| ||| || ||
Sbjct 782 GCGAAGATCAGCCTCTGCTGATCCGGAGGGATGCCTTCCTTGTC-CTGAATTTTAGCTTT 840
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | |||||| | | |||||| || | ||||| ||| || ||||||| ||
Sbjct 841 CACATTATCGATCGTGTCAGAGCTCTCCACCTCCAGGGTGATGGTCTTTCCGGTCAAGGT 900
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 901 CTTCACGAAGATCTGCAT 918
Score = 109 bits (120), Expect = 5e-19
Identities = 150/207 (72%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGG-ACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| || || || || ||| || || | || || ||
Sbjct 941 AAGTGCAGGGTTGACTCCTTCTGGATGTTATAGTCAGCCAAAGTCCTACCA-TCTTCCAG 999
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || ||| | || |||| ||||||||| || ||||| || |||||||| |||
Sbjct 1000 CTGCTTTCCAGCGAAGATCAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGAT 1059
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||||| | |||| ||||| | ||| || || | ||||| ||| |||||
Sbjct 1060 CTTAGCCTTGACGTTGTCAATGGTGTCCGAACTCTCAACCTCTAAGGTGATGGTCTTGCC 1119
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || ||||||||||||||
Sbjct 1120 GGTCAACGTCTTGACGAAAATCTGCAT 1146
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || || |||||| | | || ||| | ||||| || ||||| ||
Sbjct 1178 GTCGACTCCTTCTGGATGTTATAATCGGCAAGGGTACGACCA-TCCTCTAGTTGCTTCCC 1236
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || | |||||||| || || || || |||||||| ||||||| |||
Sbjct 1237 GGCGAAGATAAGTCTTTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTTGCCTT 1296
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | || || || |||| ||||| |||||| || ||||| ||
Sbjct 1297 AACGTTATCGATGGTATCAGAGGATTCAACCTCGAGGGTGATGGTTTTACCTGTCAGGGT 1356
Query 133643 TTTTACGAAAATCTGCAT 133660
||||||||||| |||||
Sbjct 1357 CTTTACGAAAATTTGCAT 1374
>seq279770
Length=767
Score = 113 bits (124), Expect = 4e-20
Identities = 151/208 (73%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGA 133512
||||| | || || || ||||| |||||||||||| | | ||| || || ||||| |
Sbjct 387 AAATGGAGTGTAGATTCCTTCTGGATATTGTAATCGGCAAGCGTTCGGCCG--TCCTCAA 330
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
| ||||| || || | || |||| ||| |||||||| || ||||| || || || |
Sbjct 329 GTTGCTTACCAGCAAAGATAAGCCTCTGTTGGTCGGGTGGAATGCCCTCTTTATCTTGAA 270
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||||| ||| | | |||| ||||| | | ||||| |||| ||||| |||||||
Sbjct 269 TCTTTGCCTTTACATTGTCAATTGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTTTTGC 210
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || ||||||||||| || |||||
Sbjct 209 CAGTGAGGGTTTTTACGAAGATTTGCAT 182
>seq81485
Length=213
Score = 104 bits (114), Expect = 2e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|||||||| ||||| || ||| | ||||| || |||||||| || || || |||||||||
Sbjct 212 TCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTG 153
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | ||| || | | ||| || || | ||||| |
Sbjct 152 TCCTGGATCTTGGACTTGACGTTGTCGATCGTATCAGATGACTCAACCTCAAGGGTGATG 93
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| |||||||| || ||||| ||||| || |||||
Sbjct 92 GTCTTGCCGGTTAGGGTTTTAACGAAGATTTGCAT 58
>seq48980
Length=3483
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| | | || ||| | ||||| | |||||| ||
Sbjct 1020 GTGGACTCCTTCTGGATGTTGTAGTCGGCAAGTGTTCGACCA-TCCTCCATCTGCTTACC 962
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| ||||||| ||||||||||| || || || || ||||| || |||||| |||
Sbjct 961 GGCGAAAATGAGACGCTGCTGGTCCGGCGGTATTCCCTCCTTATCCTGAATCTTTGCCTT 902
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | || || | ||| || |||| || | ||| || ||||| || ||
Sbjct 901 GACATTATCGATGGTATCAGAACTCTCGACCTCGAGAGTTATGGTCTTCCCGGTAAGCGT 842
Query 133643 TTTTACGAAAATCTGCAT 133660
||| ||||| ||||||||
Sbjct 841 TTTCACGAAGATCTGCAT 824
>seq281664
Length=792
Score = 98.7 bits (108), Expect = 1e-15
Identities = 143/200 (72%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521
|| ||||| ||||| || ||||| || | | || || || ||||| | ||| || |
Sbjct 580 GTAGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTTCGGCCG--TCCTCCAACTGTTTTC 637
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| ||| | ||||| | ||| ||||| || ||||| ||||||||||| ||||| ||
Sbjct 638 CAGCGAAGATGAGTCTCTGTTGGTCTGGGGGGATACCTTCCTTGTCCTGAATCTTGGCCT 697
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| ||||| | | ||| || || | ||||| ||| || ||||| ||||
Sbjct 698 TCACGTTGTCAATTGTGTCTGAAGACTCAACCTCCAAGGTGATGGTCTTTCCGGTGAGAG 757
Query 133642 TTTTTACGAAAATCTGCATG 133661
|||| || ||||| ||||||
Sbjct 758 TTTTGACAAAAATTTGCATG 777
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| || |||||||| | | || || || |||||||| ||
Sbjct 123 GGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTCCTTCCATCTTCCAGCTGCTTTCC 182
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | |||||||||||| ||||| || ||||||||||| ||| ||| |||
Sbjct 183 AGCAAAGATCAACCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCCTGGATTTTTGCCTT 242
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || || | |||||| || | ||||| ||| || || ||||| ||
Sbjct 243 AACATTGTCGATTGTATCAGAACTCTCCACCTCCAAGGTGATGGTCTTCCCTGTCAGGGT 302
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || ||||||||
Sbjct 303 CTTGACAAAGATCTGCAT 320
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||| ||||| ||||| || ||||| || | | || ||||| |||||||| ||
Sbjct 351 GGTTGACTCCTTCTGAATGTTGTAGTCAGCAAGAGTCCTTCCATCCTCCAGCTGCTTTCC 410
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581
|| | || | | |||||||| || ||||||||||||||||| ||| ||||| ||
Sbjct 411 GGCAAAGATCAATCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTC-CTGAATTTTTGCCT 469
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | || | || || | | ||| || |||| ||||| ||| || || |||| ||
Sbjct 470 TCACGTTGTCGATGGTATCAGAGCTCTCGACCTCGAGGGTGATGGTCTTTCCAGTCAAAG 529
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||| ||||||||
Sbjct 530 TCTTAACGAAGATCTGCAT 548
>seq281289
Length=787
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/208 (72%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| || ||||| ||||| || |||||| | | || ||| | ||||||||
Sbjct 531 AAGTGAAGGGTTGATTCTTTTTGTATGTTATAATCGGCGAGGGTTCGACCA-TCCTCGAG 473
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || |||| |||| |||||||| |||||||| || || || || |||
Sbjct 472 CTGCTTTCCAGCAAAAATAAGCCTTTGCTGGTCTGGAGGGATTCCCTCTTTATC-CTGAA 414
Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| | ||| | | |||| || || | ||||| || | ||| | |||||||
Sbjct 413 TTTTGGCCTTCACATTGTCAATAGTATCAGAACTTTCCACCTCAAGGGTTATTGTTTTGC 354
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| |||||||| || || || |||||
Sbjct 353 CGGTGAGAGTTTTCACAAAGATTTGCAT 326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 481577081410880
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