Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_025416.1 Length=141907 Score E Sequences producing significant alignments: (Bits) Value seq235819 91.5 1e-13 >seq235819 Length=465 Score = 91.5 bits (100), Expect = 1e-13 Identities = 109/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 28897 CTGCATTTTCTTTGTCATTAATTGATTTATCTTTGTGAGGGCTATACGGAGTTACTCCTA 28956 ||||||| || |||||||| ||||| |||| ||||| ||||| || ||||||| Sbjct 464 CTGCATTAGTCTTATCATTAATAGATTTGTCTTGATGAGGACTATAAGGTTTTACTCCCT 405 Query 28957 CAATGCCATCTACTTCTTTATGTTGTTTATCTCTGTAATCTACCATAGCTTCATTTAGGA 29016 |||| | | ||| ||||||||||| || | ||||| ||||| |||||||||| | Sbjct 404 CAATTTCGCTAATTTCATTATGTTGTTTTTCACGATAATCAACCATCGCTTCATTTAAAA 345 Query 29017 TATGTCCACCCATATAAATTACTTTGTC 29044 |||| || | | ||||| ||||| || Sbjct 344 TATGACCTGCTAGGTAAATAACTTTTTC 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452242987035840