Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq21568 109 4e-19 seq281289 82.4 6e-11 >seq21568 Length=652 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| ||||| || || |||||||||||||||||||| || ||||| |||| Sbjct 538 AATGCAGATTTTCGTGAAGACATTGACTGGCAAGACCATCACTTTGGAAGTAGAAAGTTC 479 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| | | | | | ||||| ||| ||| |||||||| || | || ||| || Sbjct 478 CGACACCATCGACAATGTGAAGACAAAGATTCAAGACAAAGAGGGAATCCCACCTGACCA 419 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 || ||||| || | ||| ||||| ||| | |||||| | |||| | | |||||||| Sbjct 418 GCAGAGGCTGATCTTTGCAGGCAAGCAACTGGAAGATGGCAGAACTCTAGCAGATTACAA 359 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 ||| ||||| ||||| || || ||||| || Sbjct 358 CATCCAAAAGGAATCAACTCTGCATTTGGT 329 >seq281289 Length=787 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| | || ||||| || || ||| | || ||| Sbjct 326 ATGCAAATCTTTGTGAAAACTCTCACCGGCAAAACAATAACCCTTGAGGTGGAAAGTTCT 385 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | | ||||| |||||| || ||||| || | || || || Sbjct 386 GATACTATTGACAATGTGAAGGCCAAAATTCAGGATAAAGAGGGAATCCCTCCAGACCAG 445 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||||||||||| ||| || || || | || ||| | ||| | | |||||| ||| Sbjct 446 CAAAGGCTTATTTTTGCTGGAAAGCAGCTCGAGGATGGTCGAACCCTCGCCGATTATAAC 505 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 |||||||||||||| || || || || || | | ||||| || ||| Sbjct 506 ATACAAAAAGAATCAACCCTTCACTTGGTGCTCCGTTTACGTGGTGGA 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400833516260096