Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq126021 154 1e-32 seq48980 122 9e-23 seq279770 118 1e-21 seq281664 116 4e-21 seq21568 114 1e-20 seq44495 107 2e-18 seq281289 91.5 1e-13 seq280556 86.0 6e-12 seq124980 82.4 8e-11 seq81485 82.4 8e-11 >seq126021 Length=250 Score = 154 bits (170), Expect = 1e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || || | ||| ||||| || ||||| ||||||||||||||||| ||| Sbjct 245 TTCCACCACGAAGACGGAGCACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGG 186 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | | || || || |||||||| ||||||||||| ||||| | |||||||| || | Sbjct 185 CTAGTGTACGACCATCTTCGAGCTGCTTGCCTGCAAAGATCAACCTTTGCTGATCCGGGG 126 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || |||||||| || |||||| ||| | |||||| || ||| | Sbjct 125 GAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGTCGATTGTGTCAGAGCTTTCAA 66 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 | || || ||||| || || || || | ||||| ||||||||||||||| Sbjct 65 CTTCTAGTGTAATAGTCTTCCCCGTGAGCGTTTTGACGAAAATTTGCATT 16 >seq48980 Length=3483 Score = 122 bits (134), Expect = 9e-23 Identities = 157/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 134502 AACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCG 134561 || || || || |||||||| ||||| || |||||||||||| ||| || || || Sbjct 1035 AAGACAAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGTGTTCGACCATCC 976 Query 134562 TCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCT 134621 || | ||| || || || ||||| | ||||||||| || |||||||| || || || || Sbjct 975 TCCATCTGCTTACCGGCGAAAATGAGACGCTGCTGGTCCGGCGGTATTCCCTCCTTATCC 916 Query 134622 TGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTT 134681 ||||| ||| ||||| || | || || || || || |||||||| ||||| Sbjct 915 TGAATCTTTGCCTTGACATTATCGATGGTATCAGAACTCTCGACCTCGAGAGTTATGGTC 856 Query 134682 TTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 || ||||| | ||||| ||||| || ||||| |||| Sbjct 855 TTCCCGGTAAGCGTTTTCACGAAGATCTGCATATTGT 819 >seq279770 Length=767 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || |||||||| ||||| ||||||||| | | || || ||| || ||||| Sbjct 612 TGCAGGGTAGATTCCTTCTGAATATTGTAGTCGGCGAGAGTTCGACCGTCCTCAAGCTGC 553 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || |||||||||| | ||| ||||| || || || || || || ||||| ||||| Sbjct 552 TTACCAGCAAAAATCAGTCTCTGTTGATCAGGTGGGATACCCTCCTTGTCTTGGATTTTA 493 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | ||| || || |||||| || |||||||||||||| || || Sbjct 492 GCCTTGACATTGTCAATTGTATCAGAACTTTCCACCTCAAGAGTAATGGTTTTGCCAGTA 433 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || || || |||||||| Sbjct 432 AGGGTCTTCACAAATATTTGCAT 410 >seq281664 Length=792 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| || || || | || ||||| || || || ||||| |||||||||||||| Sbjct 320 TTCCTCCCCTCAGACGAAGGACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAGTCAG 379 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 ||| || || || ||||| || || ||||| ||||| | ||||| || || | Sbjct 380 CAAGAGTCCTTCCATCCTCCAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGG 439 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | |||||||| || || ||||||||| || || ||| | || || || || | Sbjct 440 GGATGCCTTCCTTGTCCTGAATTTTTGCCTTCACGTTGTCGATGGTATCAGAGCTCTCGA 499 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || ||||| || || || ||||| |||||||| || ||||| Sbjct 500 CCTCGAGGGTGATGGTCTTTCCAGTCAAAGTCTTAACGAAGATCTGCAT 548 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| ||||| || || || || || || ||||| || ||||||||||| || Sbjct 550 CCACCACGGAGACGCAAGACAAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCTGCA 609 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | |||||| || || || || | | ||| || || || || Sbjct 610 AGAGTTCGGCCGTCCTCCAACTGTTTTCCAGCGAAGATGAGTCTCTGTTGGTCTGGGGGG 669 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || ||||| || || || ||| | |||||| || || || || Sbjct 670 ATACCTTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATTGTGTCTGAAGACTCAACC 729 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || ||||| | |||||| || ||||||||||| Sbjct 730 TCCAAGGTGATGGTCTTTCCGGTGAGAGTTTTGACAAAAATTTGCAT 776 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| || | ||| || | || ||||| || || || ||||| ||||||||||| || | Sbjct 93 TCCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCAGC 152 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || ||| || || ||||| || || ||||| ||||| |||||||| || || || Sbjct 153 AAGGGTCCTTCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCGCTGCTGGTCTGGAGG 212 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || |||||| || || ||| | ||| || || ||||| Sbjct 213 AATTCCTTCCTTGTCCTGGATTTTTGCCTTAACATTGTCGATTGTATCAGAACTCTCCAC 272 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || ||||| || || || | || || || || || |||||| Sbjct 273 CTCCAAGGTGATGGTCTTCCCTGTCAGGGTCTTGACAAAGATCTGCATT 321 >seq21568 Length=652 Score = 114 bits (126), Expect = 1e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 ||||| | ||| | || || || ||||||||||| |||||||| || || | | | || Sbjct 320 AGTCGAAGCACCAAATGCAGAGTTGATTCCTTTTGGATGTTGTAATCTGCTAGAGTTCTG 379 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 | || || || || ||||||||||| |||| | |||||| || || || || || || Sbjct 380 CCA-TCTTCCAGTTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGTGGGATTCCCTC 438 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 ||| |||||||| ||| || || ||| | |||||||| ||| || || | ||| Sbjct 439 TTTGTCTTGAATCTTTGTCTTCACATTGTCGATGGTGTCGGAACTTTCTACTTCCAAAGT 498 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || || || || || |||||||| |||||| Sbjct 499 GATGGTCTTGCCAGTCAATGTCTTCACGAAAATCTGCATT 538 >seq44495 Length=1402 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| |||||||| || ||||| ||||| ||||||||||| || | Sbjct 692 CCACCACGGAGACGCAGGACGAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGCG 751 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || ||||| || || || || |||| | ||||||||| || || Sbjct 752 AGAGTCCTTCCATCCTCAAGCTGCTTCCCAGCGAAGATCAGCCTCTGCTGATCCGGAGGG 811 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || |||||||| ||| || || | ||||| || ||||| Sbjct 812 ATGCCTTCCTTGTCCTGAATTTTAGCTTTCACATTATCGATCGTGTCAGAGCTCTCCACC 871 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || ||||| || || || ||||| || ||||| Sbjct 872 TCCAGGGTGATGGTCTTTCCGGTCAAGGTCTTCACGAAGATCTGCAT 918 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| ||||| || || || ||||| || ||||| || ||| ||| ||| || Sbjct 1157 AGACGCAACACAAGGTGAAGAGTCGACTCCTTCTGGATGTTATAATCGGCAAGGGTACGA 1216 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || || || || || || || || | | ||||| || || || || || || Sbjct 1217 CCATCCTCTAGTTGCTTCCCGGCGAAGATAAGTCTTTGCTGGTCTGGGGGAATACCCTCC 1276 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || ||| || || || | || || || ||||| || ||||| || Sbjct 1277 TTGTCCTGGATCTTTGCCTTAACGTTATCGATGGTATCAGAGGATTCAACCTCGAGGGTG 1336 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || | || || |||||||||||||| Sbjct 1337 ATGGTTTTACCTGTCAGGGTCTTTACGAAAATTTGCAT 1374 >seq281289 Length=787 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || |||||||| ||||| |||||||| ||||| | || | || || || ||||| || Sbjct 750 GTTGATTCCTTCTGAATATTGTAGTCCGCCAAAG-TGCGGCCATCTTCAAGTTGTTTACC 692 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 || ||||| | | |||||| || || || || || ||||| ||||| || || || Sbjct 691 AGCGAAAATTAGTCTCTGCTGGTCAGGGGGGATTCCCTCTTTATCTTGGATCTTAGCCTT 632 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 || || | || || || |||||| || | || ||||||||||| || | || Sbjct 631 CACATTATCGATGGTATCAGAGCTTTCCACCTCTAAGGTGATGGTTTTACCAGTGAGGGT 572 Query 134696 TTTAACGAAAATTTGCATT 134714 ||| ||||| ||||||||| Sbjct 571 TTTCACGAAGATTTGCATT 553 >seq280556 Length=777 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 ||||| | || |||| ||| | ||| || || ||||||||||||||||| || || || Sbjct 535 CCTCCACGAAGACGCAGCACCAAGTGAAGTGTCGATTCCTTTTGAATGTTATAATCGGCT 594 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | || | || || | || || || || ||||| || | || || || || || Sbjct 595 AAAGTCCTGCCA-TCTTCCAATTGCTTCCCAGCGAAAATTAACCTTTGTTGGTCTGGTGG 653 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| ||||| || || ||| || || | || || || || || Sbjct 654 GATCCCTTCTTTATCTTGGATCTTAGCTTTAACGTTATCAATAGTATCTGAACTCTCAAC 713 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | ||| || ||||| || ||||| || || || |||||||||||| Sbjct 714 TTCCAAAGTGATTGTTTTTCCTGTTAAGGTCTTCACAAAAATTTGCATT 762 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTC 134563 || ||||| || |||||||||||||||||||||||||| ||||| || | || || Sbjct 325 ACAAGGTGGAGGGTGGATTCCTTTTGAATGTTGTAGTCAGCCAA-TGTACGTCCATCCTC 383 Query 134564 GAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTG 134623 | || || || || ||||||| | ||||| || || || || || || || || || Sbjct 384 CAATTGCTTCCCAGCGAAAATCAGTCTTTGCTGGTCAGGAGGAATACCCTCCTTGTCCTG 443 Query 134624 AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 ||||| || || ||| | ||||| || || || || | || ||||| || Sbjct 444 GATTTTAGCCTTCACATTGTCGATAGTGTCTGAGCTCTCAACTTCTAATGTGATGGTCTT 503 Query 134684 ACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || |||||||| Sbjct 504 TCCTGTTAAGGTCTTCACAAATATTTGCAT 533 >seq124980 Length=249 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || ||||| || || |||||||||||| ||| || | || || Sbjct 141 ACGAGGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCCTCA 82 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| ||||| ||||| || |||||||| || || || ||||| || || || Sbjct 81 AGTTGCTTGCCGGCAAAGATCAATCGTTGCTGATCCGGGGGAATTCCTTCCTTATCCTGG 22 Query 134625 ATTTT 134629 || || Sbjct 21 ATCTT 17 >seq81485 Length=213 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || ||||| || || || || || || | ||| ||||| || || || || ||||| || Sbjct 212 TCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGGGGAATTCCTTCCTTG 153 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || || || ||||| ||| | || || || || || || || || || ||| Sbjct 152 TCCTGGATCTTGGACTTGACGTTGTCGATCGTATCAGATGACTCAACCTCAAGGGTGATG 93 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||||| ||||||||||| |||||||| Sbjct 92 GTCTTGCCGGTTAGGGTTTTAACGAAGATTTGCAT 58 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503470861042240