Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq218924 84.2 2e-11 >seq218924 Length=406 Score = 84.2 bits (92), Expect = 2e-11 Identities = 155/222 (70%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 ||||||||||| ||||| ||||| || |||| | |||||||| || ||||| || Sbjct 119 CCTTCATCTCTTGAAATCAACTCATTTGAGAACGTTAATCCAGGCATTAGCCCACGTTTT 178 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || ||||| || || | ||||| ||| |||||| || || || ||||| || || Sbjct 179 TTTAACCAGAAAATAGAGCAGAAACTACCTGAGAAGAAAATTCCCTCAACACAAGCGAAC 238 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAA--GTC-ATCCAAGTCTGAGCCCATTCA 74945 || | || || | ||||||| | || | | ||| ||||| || ||||| ||| Sbjct 239 GCCAAAATCCGCTCAGCGAACGAT---TCTGTACTGTCAATCCACTTCAACGCCCAATCA 295 Query 74946 GCTTTTCGTTTGACCGCA-GGGACAGTATCGATCGCTTGGAA 74986 || ||| |||| |||| |||||||| || || || |||| Sbjct 296 GCCTTTTTCTTGA-CGCAGGGGACAGTTTCAATAGCACGGAA 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545128972897600