Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_028765.1 Length=142348 Score E Sequences producing significant alignments: (Bits) Value seq235819 111 1e-19 >seq235819 Length=465 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 21007 TCTGCATTAGCTTTATCATTAATTGATTTATCTTTATGAGGGCTATAAGGAGTAACTCCT 21066 |||||||||| ||||||||||| ||||| |||| |||||| |||||||| | ||||| Sbjct 465 TCTGCATTAGTCTTATCATTAATAGATTTGTCTTGATGAGGACTATAAGGTTTTACTCCC 406 Query 21067 ACAATACCTTCTACTTGTTTATGTTGTTTGTCTCTATATTCTACCATTGCATCATTTAAA 21126 |||| | | || ||||||||||| || | ||| || ||||| || ||||||||| Sbjct 405 TCAATTTCGCTAATTTCATTATGTTGTTTTTCACGATAATCAACCATCGCTTCATTTAAA 346 Query 21127 ATATGTCCACCCATATAAATTACTTTGTC 21155 ||||| || | | ||||| ||||| || Sbjct 345 ATATGACCTGCTAGGTAAATAACTTTTTC 317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 453648804860160