Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_028821.1 Length=40670 Score E Sequences producing significant alignments: (Bits) Value seq11608 100 7e-17 >seq11608 Length=226 Score = 100 bits (110), Expect = 7e-17 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 26342 CACTTCCTCTACATTCATGATTATTTTTGCTTCTTCTGCATATTGCTTAAAGCTTTCAAT 26401 ||||||||| || | | || ||||||| ||| ||||||||||||||||| || | || Sbjct 122 CACTTCCTCCACTTCTAAAATAATTTTTGGTTCCTCTGCATATTGCTTAAAACTGTGTAT 63 Query 26402 GTGTGCAATTTGGTTATCATCTTTCCATAGATGATCGTTAGCAGCGTCTAATACTGTTTT 26461 | | ||||| ||||| ||||||||||| |||||||| || || ||||| || ||||| Sbjct 62 TTCAACGATTTGATTATCGTCTTTCCATAGGTGATCGTTCGCTGCATCTAACACAGTTTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129551302190208