Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19]
305,112 sequences; 176,727,258 total letters
Query= NC_028864.1
Length=43189
Score E
Sequences producing significant alignments: (Bits) Value
seq178946 179 1e-40
seq224806 95.1 3e-15
>seq178946
Length=318
Score = 179 bits (198), Expect = 1e-40
Identities = 136/159 (86%), Gaps = 1/159 (1%)
Strand=Plus/Minus
Query 7236 AACGCTGAACCTTCTAATACGTTTGAAACAAAGATTAGACATTCACCTTCAATAACAATT 7295
|||||||| ||||||||||| || ||||| ||||||||||||||||||||||| ||||||
Sbjct 318 AACGCTGAGCCTTCTAATACATTCGAAACCAAGATTAGACATTCACCTTCAATCACAATT 259
Query 7296 AACAATAAGAAATTTGCAAATCCTAGCATTACGGACGTAGTAGAAGCAATTAGAAATGGA 7355
||| |||||||||||| || || || || | | |||||||||||||||||||| |||
Sbjct 258 AACGATAAGAAATTTGTGAACCCAAGTATCAGTCAAGTAGTAGAAGCAATTAGAAACGGA 199
Query 7356 AACTAAAAATTAATTAAAAGGACGGTATTTAATTATGAA 7394
|||||| || || ||||||||||||| | |||||||||
Sbjct 198 AACTAATAA-AAAATAAAAGGACGGTAATCAATTATGAA 161
>seq224806
Length=425
Score = 95.1 bits (104), Expect = 3e-15
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 41903 AAATAAGAGGTGTGACACCTCGTAATGATTTACTAAATGTTAATGTATCAGCAGAAATAA 41962
|||| ||||| ||||||||| | || |||||| |||||| ||| || | | | || | |
Sbjct 191 AAATTAGAGGCGTGACACCTAGAAACGATTTATTAAATGCTAACGTTACTGGACAACTCA 132
Query 41963 ATATAAATTATCGTTTATCTGAATTAGGTTTTATTACTAATAAAAATGATATGGA 42017
|| |||||||| | ||| || ||||||||||| |||| |||||| ||||||||
Sbjct 131 ATTTAAATTATAGATTAATCGAGTTAGGTTTTATAACTAGTAAAAAGGATATGGA 77
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137582896259344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |