Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lagenaria_20siceraria_20[genbank_20GCA_5F000466325.1_202013-09-19] 305,112 sequences; 176,727,258 total letters Query= NC_029010.1 Length=40592 Score E Sequences producing significant alignments: (Bits) Value seq224806 251 2e-62 >seq224806 Length=425 Score = 251 bits (278), Expect = 2e-62 Identities = 309/422 (73%), Gaps = 0/422 (0%) Strand=Plus/Minus Query 29186 TCGATGAATCAAGATTTATATCAAGATACATTGTACGGTCAACGTGTTGGAAACTATAAA 29245 || ||||| ||||| || ||||||||||| | || || |||||||| || |||||| | Sbjct 423 TCAATGAACCAAGACTTGTATCAAGATACGCTATATGGACAACGTGTAGGTAACTATTCA 364 Query 29246 GATTATGGCATGTACTGGATTAAAAGTGAAGTCAAACCGGATGCAATCATAGAGTTTCAT 29305 ||||| || | || ||| |||||| | || ||||| |||| || |||| || || Sbjct 363 GATTACGGTTTATATTGGGTTAAAAAGAACGTGAAACCTGATGTGATTGTAGAATTCCAC 304 Query 29306 TTAGATTCTGCTAGCCCACAAGCAAGTGGCGGGCATGTAATCATTAGCGATCGTTTCCCA 29365 |||||| ||||||| ||||||||||||||||| ||||| || | ||||| | | || Sbjct 303 TTAGATGCTGCTAGTCCACAAGCAAGTGGCGGACATGTCATTGTAAGCGACAGATATCCT 244 Query 29366 GCTGATGACATTGACAAGGCATTAAGTAGTGCATTAGATAAAACAGTGGGTAAAATAAGA 29425 || || || || ||||| || || ||| || ||| ||| ||||| || ||||| ||| Sbjct 243 GCAGACGATATAGACAAAGCGGTATCTAGCGCTCTAGGTAAGACAGTTGGCAAAATTAGA 184 Query 29426 GGTGTGACACCTAGAGGGGATTTATTGAACGCTAACGTGTCTGCTGATCTTAATCTTAAT 29485 || |||||||||||| |||||||| || |||||||| ||| | || ||| | ||| Sbjct 183 GGCGTGACACCTAGAAACGATTTATTAAATGCTAACGTTACTGGACAACTCAATTTAAAT 124 Query 29486 TATCGTTTAATCGAATTAGGTTTTATCACATCTACGAAAGATTTAAACTACATTAAAAAC 29545 ||| | |||||||| ||||||||||| || || || ||| | |||| || | | Sbjct 123 TATAGATTAATCGAGTTAGGTTTTATAACTAGTAAAAAGGATATGGACTATATCACTACA 64 Query 29546 AATTTAGACAGCTTCACGAAGCGGATTGCTGAAGCCATTAACGGCAGACAAATTGATGCG 29605 | |||| || || || ||||| ||||| || || || || || || ||||| ||||| Sbjct 63 CACCTAGATAGTTTTACTAAGCGTATTGCAGAGGCTATCAATGGTAGGCAAATCAATGCG 4 Query 29606 CC 29607 || Sbjct 3 CC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129302606542176